Gene Rsph17025_0666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0666 
Symbol 
ID5083104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp669586 
End bp670689 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content66% 
IMG OID640482224 
Productspermidine/putrescine ABC transporter ATPase subunit 
Protein accessionYP_001166877 
Protein GI146276718 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID[TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0172946 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGGCTT CTACCCAGGA CGACGGTTTC GTCGTTTTCG AACATGTGCA GAAAAGCTAC 
GACGGGGAGA CGCTGGTCGT TAAGGATCTC AACCTGACCA TAGGGCAGGG CGAGTTCCTC
ACGATGCTGG GGCCCTCCGG GTCGGGCAAG ACCACCTGTC TCATGATGCT GGCGGGGTTC
GAGACCGCCA CCCACGGCGA CATCCGGCTC GACGGGCGCC CGATCAACAC CGTGCCCCCG
CACAAGCGCG GCATCGGAAT GGTGTTCCAG AACTACGCGC TCTTTCCCCA CATGACGGTC
GGCGAGAACC TCTCGTTTCC GCTCGAGGTG CGGGGCATGT CGCGGAGCGA CCGCGAGCGC
AAGATCAAGC GCGCGCTCGA CATGGTGCAG ATGGGCGCCT TTGCGAACCG CCGCCCGGCC
CAGCTCTCGG GCGGCCAGCA GCAGCGGATC GCGCTGGCCC GCGCGCTGGT GTTCGACCCG
CAGCTCGTGC TGATGGACGA GCCGCTCGGC GCGCTCGACA AGCAGCTGCG CGAGCACATG
CAGTTCGAGA TCAAGCACCT GCACGAGAGC CTTGGCATCA CGGTGGTCTA TGTCACCCAC
GACCAGGGCG AGGCGCTGAC CATGTCGGAC CGGATCGCCG TCTTCAACGA CGGCCGCATC
CAGCAACTCG CCCCGCCCGA CGAGCTGTAC GAGCGCCCGC GGAACAGCTT CGTCGCCAGC
TTCATCGGCG AGAACAACCG CCTGCCCGGC GTGATCGAGG AGATCGCCGA GGGCCGCGCG
CTGGTCCGGC TCGACACCGG CGAGCTGATC GACGCAACTC CGGTCAACGT CAGCCACAAG
GGCCAGAAGA CTCTCGTCTC GATCCGCCCC GAACGGGTGG AATACAAGCC CGAGATGCTG
CCGCCGAACG CCCACCTCAT CGAGGCCGAG GTGATGGAGT TCATCTACAT GGGCGATATC
TTCCGCACCC GCCTGCGGGT CGCCGGTTCC GAGGAGTTCG TCATCAAGAG CCGGAACACG
CTGGGCCAGC GGATGCTGCA GCCCGGCGAA AGGATCCGGA TCGGCTGGGC GCCCCAGGAC
GCGCGCGCGC TCGATCCGCT TTGA
 
Protein sequence
MVASTQDDGF VVFEHVQKSY DGETLVVKDL NLTIGQGEFL TMLGPSGSGK TTCLMMLAGF 
ETATHGDIRL DGRPINTVPP HKRGIGMVFQ NYALFPHMTV GENLSFPLEV RGMSRSDRER
KIKRALDMVQ MGAFANRRPA QLSGGQQQRI ALARALVFDP QLVLMDEPLG ALDKQLREHM
QFEIKHLHES LGITVVYVTH DQGEALTMSD RIAVFNDGRI QQLAPPDELY ERPRNSFVAS
FIGENNRLPG VIEEIAEGRA LVRLDTGELI DATPVNVSHK GQKTLVSIRP ERVEYKPEML
PPNAHLIEAE VMEFIYMGDI FRTRLRVAGS EEFVIKSRNT LGQRMLQPGE RIRIGWAPQD
ARALDPL