Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0507 |
Symbol | |
ID | 5082701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 505635 |
End bp | 507452 |
Gene Length | 1818 bp |
Protein Length | 605 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640482061 |
Product | Na+/solute symporter |
Protein accession | YP_001166718 |
Protein GI | 146276559 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.318357 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0591632 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCAAT TCACCCTCAA CCTGATCGTG GTTGGCATCA CCTTCGCCAT CTACATCGGG ATCGCGGTCT GGGCCCGGGC GGGCTCCACC GCCGAGTTCT ATGCGGCCGG CCAGGGCGTC CACCCCGTGG CGAACGGCAT GGCGACCGGC GCCGACTGGA TGTCGGCGGC GTCCTTCATC TCGATGGCCG GCATCATCGC GCTGGCCCCG GCGGGCGGCT ACACGCAGTC GGCCTTCCTC ATGGGCTGGA CCGGCGGCTA TGTGCTGCTG GCGCTGCTGC TGGCGCCCTA CCTGCGCAAG TTCGGCAAGT TCACCGTGCC CGAATTCATC GGTGACCGCT TCTACTCGGG CGGTGCGCGC CTTCTGGCGG TGATCTGCCT CATCGTGATC TCGGTCACCT ACGTGATCGG GCAGATGCGC GGCGTGGGCG TGACCTTCGG GCGCTTCCTC GAGATCTCGA CCGACATGGG CCTCTATATC GGCGCGGCGA TCGTCTTCGC CTATGCCGTG TTCGGCGGCA TGAAGGGCAT CACCTACACC CAGGTCGCCC AGTATGTCGT GCTGATCATC GCCTACACGA TCCCGGCGAT CTTCATCTCG CTCGCGCTGA CCAACTCGTT CCTGCCGCAG CTGGGCCTGA TCGGCAACTA TGCCCCGGGC GGCGGCGACC AGGCGTTCCT GGCCAAGCTC GACCAGGTGG TGACCGAACT GGGCTTCACG GCCTATACCG CCGACACCAC CAGCCAGCTG AACATGTTCC TGTTCACCAT GTCGCTGATG ATCGGCACCG CGGGCCTTCC GCACGTCATC ATCCGCTTCT TCACCGTGCC GAAGGTGGCC GACGCCCGTT CGTCCGCGGG CTGGGCACTG GTCTTCATCG CCCTGCTCTA CACCGTGGCC CCGGCCGTCG GCTCGATGGC GCGCCTGAAC CTGACGACCA CCATGTGGCC GAACGCCGTG GCCGGCAACG CGCTCGACGG AGACGCTATC TCGGTCGAGG CGATCCAGAA CGACCCGCGC CTGAGCTGGG TGAAGACCTG GGAACAGACC GGCCTTCTCG TCATGGAAGA CAAGAACGGC GACGGCATGA TCCAGTACTA CAACGAGGCC AACCCGGCGA TGCAGGCCAT CGCGGCCGAG CGTGGCTGGG TCGGCAACGA GGTCACCAAG ATCGACAACG ACATCATGGT GCTCGCCAAC CCCGAGATCG CCGCTCTTCC GGGCTGGGTC ATCGCGCTCG TGGCCGCCGG TGCGCTGGCT GCCGCCCTCT CGACCGCCGC GGGCCTCCTG CTCGCCATCT CGTCGGCGAT CTCGCACGAC CTCATCAAGG GCTCGATCAA CCCCAACATC TCGGAAAAGG GCGAGCTTCT GGCCGCGCGG ATCTCGATGA CGGGTGCGAT CGTGATCGCC ACCTGGCTTG GCCTCAACCC GCCCGGCTTC GCCGCGCAGG TGGTGGCGCT GGCCTTCGGT CTGGCCGCCG CGACGATCTT CCCGGCGCTG ATGATGGGGA TCTTCTCCAA GCGCGTGAAC AAGGAAGGCG CCATCCTCGG GATGCTCGTC GGCCTCGTCT TCACCGCGGT CTACATCTTC CTCTACAAGG GCTGGTTCTT CATCCCCGGC ACCGCCACGT TCGAGGACGT GCCCGCCAAC TACTTCTTCG GCATCTCGCC GCTGTCCATC GGGACCGTGG GTGCGCTGCT GAACTTCGGC GTGGCCTTCC TGGTGTCGGC CATCACGAAG GCGCCCCCGC GCGAAGTGGT GGACCTGGTC GAGAGCATCC GCATCCCGCG CGGTGCCGGC AAGGCCACGG CCCACTGA
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Protein sequence | MDQFTLNLIV VGITFAIYIG IAVWARAGST AEFYAAGQGV HPVANGMATG ADWMSAASFI SMAGIIALAP AGGYTQSAFL MGWTGGYVLL ALLLAPYLRK FGKFTVPEFI GDRFYSGGAR LLAVICLIVI SVTYVIGQMR GVGVTFGRFL EISTDMGLYI GAAIVFAYAV FGGMKGITYT QVAQYVVLII AYTIPAIFIS LALTNSFLPQ LGLIGNYAPG GGDQAFLAKL DQVVTELGFT AYTADTTSQL NMFLFTMSLM IGTAGLPHVI IRFFTVPKVA DARSSAGWAL VFIALLYTVA PAVGSMARLN LTTTMWPNAV AGNALDGDAI SVEAIQNDPR LSWVKTWEQT GLLVMEDKNG DGMIQYYNEA NPAMQAIAAE RGWVGNEVTK IDNDIMVLAN PEIAALPGWV IALVAAGALA AALSTAAGLL LAISSAISHD LIKGSINPNI SEKGELLAAR ISMTGAIVIA TWLGLNPPGF AAQVVALAFG LAAATIFPAL MMGIFSKRVN KEGAILGMLV GLVFTAVYIF LYKGWFFIPG TATFEDVPAN YFFGISPLSI GTVGALLNFG VAFLVSAITK APPREVVDLV ESIRIPRGAG KATAH
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