Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0474 |
Symbol | |
ID | 5082833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 471521 |
End bp | 472573 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640482027 |
Product | transposase IS116/IS110/IS902 family protein |
Protein accession | YP_001166685 |
Protein GI | 146276526 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3547] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0599215 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGTTTT TCGTGGGTCT TGATGTGTCG CTCGACGAGA CGCACATCTG CGTCGTCGAC GAAGGCGGTC GCATCGTCAA GGAGACACGC GCTGCGAGCG AGCCGAAGGC GATTGCCAAG GCTATCCGGC ACCAGGACCG GCGCATCGAG CATGTCGGCC TCGAAGCCGG AAACCTTTCC CAGTGGCTCC ACGAGGGGCT TGTCCGCGAG GGGTTCTCTG TCTCGGTGAT GGAGGCGCGT CACGTCCGAG CGGCCTTCGC CGCGATGCGC GTCAAGACCG ATCGCCATGA CGCCCGCGGC ATCGCCCAGC TCGTGCGCCT TGGCTGGTTC AAGCGCGTAC ACGTGAAGTC GCTGACCGCC CAGGAGACCC GCGTTCTGCT CACCGCGCGC ACCTTCCTCA TAGAAAAAGT GACGGCGACG GAGAACTCGC TCCGCGCCGC GCTGAGGACC TTCGGGCTGA AGATGGGATC TGTGACGCGG AAGACGTGGG AGGCCCGGGC GCGCGAACTT GCCGACGGAA ACCCGCTCCT CGAGGGCATC GTGGACGCCA TGTTGCGGGT GCGAGCCCTG CTCCTTGACG AACTTGCCAG CCTCGACGGC CAGCTCATGG CACTCGCGAA GTCCGATCCC GTGACACGGC TGCTGATGAC GACCCCGGGT GTGGGCGTGA TCGTGGCGCT GACCTTCCGA AGTGCCGTCG ATGACCCGGA CCGCTTCCCA CGCAGCAGGG ATGTTGGCGC CTGGGCGGGA CTGACCCCGC GAAGGTGGCA ATCGGGCAAG ACTGATATCG CCGGACGGAT CACCAAGGCC GGTGATCCGC GGGTGCGCGT CATGCTCTTC GAGGCCGCGG CGAGCATTCT CGGGCGGGCG CGGGTCATGT CGCCCTTGAA GTCCTGGGGT TTGAGGATCG CGAAACGGAC ATCAATGAAG AAGGCGATCG TTGCCGTGAG CCGCAAGCTC GCAACGATCC TGCTGGCGAT GTGGAAGTCC GGAACCGCAT ACTGGGCGGC GGGTCGGCCA CCAGCCTCGG CCCAGGACCT CGCAGCAGCA TGA
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Protein sequence | MEFFVGLDVS LDETHICVVD EGGRIVKETR AASEPKAIAK AIRHQDRRIE HVGLEAGNLS QWLHEGLVRE GFSVSVMEAR HVRAAFAAMR VKTDRHDARG IAQLVRLGWF KRVHVKSLTA QETRVLLTAR TFLIEKVTAT ENSLRAALRT FGLKMGSVTR KTWEARAREL ADGNPLLEGI VDAMLRVRAL LLDELASLDG QLMALAKSDP VTRLLMTTPG VGVIVALTFR SAVDDPDRFP RSRDVGAWAG LTPRRWQSGK TDIAGRITKA GDPRVRVMLF EAAASILGRA RVMSPLKSWG LRIAKRTSMK KAIVAVSRKL ATILLAMWKS GTAYWAAGRP PASAQDLAAA
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