Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0457 |
Symbol | secF |
ID | 5082256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 453273 |
End bp | 454247 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640482010 |
Product | preprotein translocase subunit SecF |
Protein accession | YP_001166668 |
Protein GI | 146276509 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0341] Preprotein translocase subunit SecF |
TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family [TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0172615 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0827508 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTTCC GCCTCAAGCT CTGCCCCGAG AAGACGAACA TCAACTTCTT CCGCGCCGCG CCGTTGACCT TCGGCTTCTC GGTGTTCCTC ATGGTGGCCT CGCTCGTCGT GTGGCTGACG ATGGGACTGA ACTTCGGGAT CGACTTCCGC GGCGGCACCA CGATCCGCAC CGAATCCACC CAGCCGGTGG ATGTGGGCGC CTACCGCACC GCGCTGCAGG GGCTCGAGCT TGGGGACATC TCGATCACCG AGGTGTTCGA CCCCGGCTTC CGCGAGGATC AGCATGTCGC GATGGTCCGC ATCGGGGCGC AGGACGACAC CCAGTCGATC ACGCCCGAGC AGATCGCGAC GGTCGAGGCC GCGCTTCAGA CGGTCGATCC CACGATCACC TTCCCGTCGG TCGAGTCGGT CGGGCCCAAG GTCTCGTCCG AGCTGATCTG GTCGGCGATC ACGGCGGTTG CGGCGGCCTG TGCGGGCATC GCCTTCTACA TCTGGCTCAG GTTCGAATGG CAGTTCGCCG TGGGCTCGGT GGCGGCGCTG GTCCATGACG TGCTCGTGAC GATCGGGGTC TTCGCGCTGT TTCAGATCCG GTTCGACCTG ACGACGGTGG CGGCGCTTCT GACCGTTCTG GGCTATTCGA TCAACGACAC GGTGGTGGTC TTCGACCGGC TTCGCGAGAA CCTCGTGAAA TACAAGTCGA TGCCGCTGCG CGACGTGATG AACCTGTCGG TCAACGAGAC CCTGAGCCGG ACGCTCATGA CGCTGATGAC GACGCTGATC GCGCTGAGCG CGCTGCTGGT CTTCGGCGGC GACGTGATCC GCGGCTTTGT CTTCGCCATC ACCTTTGGCG TGGTGATCGG AACCTATTCC TCGATCTACA TGGCCAAGAA CATCGTGCTC TATCTCGGCG TTGACCGCGG AGGGCCGAAG AAGGACAGCA AGGCGGGCAC CCAGTTCGCC AACATCGACG CGTGA
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Protein sequence | MAFRLKLCPE KTNINFFRAA PLTFGFSVFL MVASLVVWLT MGLNFGIDFR GGTTIRTEST QPVDVGAYRT ALQGLELGDI SITEVFDPGF REDQHVAMVR IGAQDDTQSI TPEQIATVEA ALQTVDPTIT FPSVESVGPK VSSELIWSAI TAVAAACAGI AFYIWLRFEW QFAVGSVAAL VHDVLVTIGV FALFQIRFDL TTVAALLTVL GYSINDTVVV FDRLRENLVK YKSMPLRDVM NLSVNETLSR TLMTLMTTLI ALSALLVFGG DVIRGFVFAI TFGVVIGTYS SIYMAKNIVL YLGVDRGGPK KDSKAGTQFA NIDA
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