| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0400 |
|---|
| Symbol | |
|---|
| ID | 5082488 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 394094 |
|---|
| End bp | 395167 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640481952 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001166611 |
|---|
| Protein GI | 146276452 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0628] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCTTC CGATCAGCGA CCAAGCCAAG TGGTGGGGCC TTTCCACCCT CGTCTTCCTG
CTTGTCCTGT GGCTTCTCGG CGACGTGATC CTGCCCTTCA TCGTGGGCGG GGCCATCGCC
TACTTTCTCG ATCCGGTGGC CGACCGGCTC GAGCGGGCGG GCCTGAGCCG GGTGGCCGCC
ACCTCGCTCA TCTCGGTCGG CATGCTGCTC GTGGTGGTGC TGCTCGTCCT GGCCGTCATC
CCGACCCTGG CCAGCCAGTT GACCGCGCTC ATCGACGCGG CGCCCACGAT CTTCCGCCAG
CTTCACACCT TCCTGCTCGA GCATTTCCCG CAGCTCTCGG ACGAGACGAG CACGATGCGC
CAGACGCTGC TGTCGATCGG CGACACGATC AAGCAGCGCG GCGGCGAGTT GGCCAACACG
GTGCTGATCT CGGCCTATGG CGTGATCAAC GCGCTGATCT TCGTGGTCGT CGTCCCGGTC
GTGAGCTTCT ACCTGCTGCT CGACTGGGAC CCGATGGTGG CCAAGATCGA CAGCTGGCTG
CCCCGCGACC ATGCCCCCAC CCTGCGCCGC CTCGCCAGCG AGATCGACGA GGTGCTGGCA
GGATTCGTGC GGGGGCAGAT CTCGGTCTGT CTCGTGCTGG GCACCTTCTA CGCGGTGGCG
CTGGCCGCGG TGGGGCTTCA GTTCGGGCTT GTGGTGGGGG CGATCGCCGG CGCGATCACC
TTCATTCCCT ATGTCGGCGC CCTGATCGGG GGCGCGCTGG CCATCGGCCT CGCGCTCTTC
CAGTTCTGGG GCGACTGGCT CGCCATCGGG CTGGTGGCGG GCATCTTCGC GCTGGGGCAG
TTCCTCGAAG GCAACGTGAT CACCCCCCGC CTCGTCGGCG GCTCGGTGGG GCTGCATCCG
CTGTGGCTGC TCTTCGCGCT CTCGGCCTTC GGGTCGATCT TCGGCTTCGT GGGGATGCTG
GTCGCCGTTC CGGTGGCGGC GGCGATCGGG GTGCTGGCGC GCTTCGGCAT CCGGCAATAT
ACGGGCTCCC GCCTCTACCG GGGCACCCAC ATCATCACCG AGGAGGACAT GTGA
|
|---|
| Protein sequence | MALPISDQAK WWGLSTLVFL LVLWLLGDVI LPFIVGGAIA YFLDPVADRL ERAGLSRVAA
TSLISVGMLL VVVLLVLAVI PTLASQLTAL IDAAPTIFRQ LHTFLLEHFP QLSDETSTMR
QTLLSIGDTI KQRGGELANT VLISAYGVIN ALIFVVVVPV VSFYLLLDWD PMVAKIDSWL
PRDHAPTLRR LASEIDEVLA GFVRGQISVC LVLGTFYAVA LAAVGLQFGL VVGAIAGAIT
FIPYVGALIG GALAIGLALF QFWGDWLAIG LVAGIFALGQ FLEGNVITPR LVGGSVGLHP
LWLLFALSAF GSIFGFVGML VAVPVAAAIG VLARFGIRQY TGSRLYRGTH IITEEDM
|
|---|
| |