| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0349 |
|---|
| Symbol | trpA |
|---|
| ID | 5082616 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 344766 |
|---|
| End bp | 345557 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640481901 |
|---|
| Product | tryptophan synthase subunit alpha |
|---|
| Protein accession | YP_001166560 |
|---|
| Protein GI | 146276401 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0159] Tryptophan synthase alpha chain |
|---|
| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0121944 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCGGA TCGATGACAC CTTCCGGCGG CTTCGGGCCG AGGGGAAGAA GGCCTTCGTG
GCCTATATCA TGGCGGGCGA TCCCGATCTC GAGACCTCGC TCGAGGTGAT GAAGGGCCTG
CCCGGCGCGG GCGTGGACAT CATCGAGCTG GGCATGCCCT TTACCGATCC GATGGCGGAC
GGGCCGACGA TCCAGACGGC GGGGCAGCGC GCGCTCGAGG GTGGGCAGAC GCTGGCAAGG
ACGCTCGCGA TGGTGCGGGA GTTCCGCAGG GGCGATGCTT CGACGCCCAT CGTCATGATG
GGATACTACA ACCCGATCCA TGCGCGCGGC GTGGACCGCT TTCTGGCCGA GGCGCAGGAG
GCCGGGATCG ACGGGCTGAT CGTGGTGGAC CTGCCGCCCG AGGAGGATGC CGAACTGTGC
CTGCCCGCTC AGGCGGCGGG GCTGAACTTC ATCCGGCTGG CCACTCCCAC GACCGACGAC
CGCCGCCTGC CCAAGGTGCT GCAGAACACG TCGGGCTTCG TCTATTACGT CTCGATCACC
GGGATCACCG GGGCGGCCGC AGCGCAGGCG GTGGATGTGG CGCCCGAGGT CGCGCGGCTG
AAGGCGGCGA CGGACCTGCC GGTGATCGTG GGATTCGGCA TCACCTCGCC CGAGGCGGCG
CGGGACATCG CGGGCGTGGC CGACGGCTGC GTGGTCGGCT CGGCGATCGT GAAGCTCGTG
GCGGAGGGCC GTCCGGTCGC GGAGGTGCTG GACCGGGTGG CGGCGCTGGC GGCCGGCGCT
CACGCCGCCT GA
|
|---|
| Protein sequence | MTRIDDTFRR LRAEGKKAFV AYIMAGDPDL ETSLEVMKGL PGAGVDIIEL GMPFTDPMAD
GPTIQTAGQR ALEGGQTLAR TLAMVREFRR GDASTPIVMM GYYNPIHARG VDRFLAEAQE
AGIDGLIVVD LPPEEDAELC LPAQAAGLNF IRLATPTTDD RRLPKVLQNT SGFVYYVSIT
GITGAAAAQA VDVAPEVARL KAATDLPVIV GFGITSPEAA RDIAGVADGC VVGSAIVKLV
AEGRPVAEVL DRVAALAAGA HAA
|
|---|
| |