Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0333 |
Symbol | infC |
ID | 5082600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 328481 |
End bp | 329065 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640481885 |
Product | translation initiation factor IF-3 |
Protein accession | YP_001166544 |
Protein GI | 146276385 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.392305 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCGCCGCA CATTTGTTAA CCGCACAAGG AACGCCACCA TAGCCCGCAG ACCCCACAAC GCCCCGCCGC AACGCGAAAC GGGCCCCCGT GTCAACGAGC GCATCCGCTG CCCCGAGATC CGTCTGATCG GCGCCAATGG CGAGAACATC GGGATCGTCA CCCCCTCGCG CGCCATGTCG ATGGCCGAAG AGGCGGGGCT TGATCTCGTC GAGATCTCGC CGAACGCGGA ACCGCCGGTC TGCAAGATCA TGGACTTCGG CAAGTTCAAG TACGAGCAGC AGAAACGCGA GGCCGAGGCC CGCAAGAAGC AGCACATCAT CGAGATCAAG GAGATCAAGT TCCGCCCCGG GACCGATACC CACGATTTCG ACGTGAAGAT GCGCTCGGTG CTGAAGTTCC TCGGCGAGGG CGACAAGGTC AAGGTCACCC TGCGCTTCCG CGGCCGCGAG ATGGCGCACC AGGAACTCGG GCTCGAGCTT CTGAACCGGG TCGCCGCGCA GGTGTCGGAG GCCGAGGTCG GCAAGGTCGA GGCCATGCCG AAGCTCGAAG GCCGTCAGAT GGTGATGATG ATCGCCCCGA AGTAA
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Protein sequence | MRRTFVNRTR NATIARRPHN APPQRETGPR VNERIRCPEI RLIGANGENI GIVTPSRAMS MAEEAGLDLV EISPNAEPPV CKIMDFGKFK YEQQKREAEA RKKQHIIEIK EIKFRPGTDT HDFDVKMRSV LKFLGEGDKV KVTLRFRGRE MAHQELGLEL LNRVAAQVSE AEVGKVEAMP KLEGRQMVMM IAPK
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