Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0301 |
Symbol | |
ID | 5084159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 297922 |
End bp | 298890 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640481856 |
Product | type II secretion system protein |
Protein accession | YP_001166516 |
Protein GI | 146276357 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4965] Flp pilus assembly protein TadB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.83716 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACTGA GCGCGGCACC CATCATCTAC ATCCTGATCT TCGTCGCGGT GCTGCTGCTG GTCGAGGGGA TCTACCTCAC CGTCTTCGGC AAGTCGATCA GCCTCAACTC ACGGGTCAGC CGGCGGCTCG CGCTGCTGGA AAAGAACCAG AACCGCGAGC AGGTGCTGGA ACAGCTCCGC AAGGAGATGA GCCAGCACAT GAACGCCCGC GGCATCCCGC TCTATGCGGT GCTGGCCTCA AAGGCGCAGA AGGCCAACAT CGCCTTCTCG CCCAAGGCGC TGGTGGCGAT CATGGCGCTG CTGTCGGCCG TGGCCTACAT GGGCCTGACC ATCGGGACGG CCGCCTCGCC GGCCGTGCGG GTGGCGGTCG CGATCTTCAT GGGCGTGGGC GCGGTCTATG TCTGGGTGAA CAACAAGGCC AAGAAGCGCA TGGCGCTGAT CGAGGAGCAA CTGCCCGACG CGGTCGAGCT GATGGTCCGG TCGCTGCGCG TGGGTCACCC CTTCTCATCC GCCATCCAGA TCGTCGCCAA GGAGGTGCCG GACCCCCTCG GCACCGAATT CGGCGTCATC GCCGACGAGG CCGCCTATGG CCGCGACGTG GCCGAATGCA TCCGGGCCTT TGCCGAACGG ATGGACAGCC AGGACCTTCG CTTTCTGGCG GTCGCGGTGA ACATCCAGCA GCAGTCGGGC GGCAACCTGG CCGAGATCCT CGAGGGTCTG GCCAAGGTGA TCCGCTCGCG CTTCAAGCTC TTCCGCAGGG TCAAGGCCAT CACGGCCGAG GCGAAATGGT CGGGCACCTT CCTCTCGGCC TTCCCCATCG TGGCGCTGGT GATGATCTCG GTTCTCAAGC CGGACTACTA CGACGGCGTG AAGGAGACGC CGCTCTTCAT CCCCGCGGCG CTGGTGGTCG GCGCGTTTCT CGTGGCCAAC GTGATCTTCA TGAAGATCAT GGTCAACATC AAGGTATGA
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Protein sequence | MQLSAAPIIY ILIFVAVLLL VEGIYLTVFG KSISLNSRVS RRLALLEKNQ NREQVLEQLR KEMSQHMNAR GIPLYAVLAS KAQKANIAFS PKALVAIMAL LSAVAYMGLT IGTAASPAVR VAVAIFMGVG AVYVWVNNKA KKRMALIEEQ LPDAVELMVR SLRVGHPFSS AIQIVAKEVP DPLGTEFGVI ADEAAYGRDV AECIRAFAER MDSQDLRFLA VAVNIQQQSG GNLAEILEGL AKVIRSRFKL FRRVKAITAE AKWSGTFLSA FPIVALVMIS VLKPDYYDGV KETPLFIPAA LVVGAFLVAN VIFMKIMVNI KV
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