Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0300 |
Symbol | |
ID | 5084158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 296946 |
End bp | 297917 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640481855 |
Product | type II secretion system protein |
Protein accession | YP_001166515 |
Protein GI | 146276356 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2064] Flp pilus assembly protein TadC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCTTC TCAACCGTCT CGAAGGCTAC CTGATCGACA GCCTGGGCCC GCTCGGGCCG CTGATGGCGA TGGGGATGCT GGGCATCCTG CTCATCGCCC TTACGCTTCC GGTCATGCTG AAGAAGCGCG ACGAGCCCTT CGACCGGATC AAGGCGCAGC GGACGGTCGG GGCCGCGCCA GTGAGCCAGG CGCTGCGGCG CTCGTCGGGC ACCGAGAAGC TCGACAGGTT CGCCAACCTG CTCGAGCCGA AGACGGCCGA GGAGCTGTCC GCCTCCCGCC TCAAGATGAT GCGGGCGGGA TACCGCTCGA AGGGGGCGGT GCGCGCCTTC CATGCCGCCC AGTTCGCGCT CGGCGTGGGT TTTCTCGTGC TTGGGGTGCT TTATGCGCTG CTCGCCTCGG CCACGGCACC GCTGACCATG CAGCAGATGG TGATCTACAC CCTTCTGCCC GGTGCGATCG GCTACTACCT GCCCGTCTAC TGGATCAAGC GCCGCGCGCA GGAGCGGCAC GACCAGATCG TCGCGGGCTT TCCCGATGCG CTCGACATGA TGCTCGTCTG CGTCGAGGCC GGCCAGTCGC TCGACCAGTC GATCCTGCGG GTCGCGCGCG AGTCGGCGTC AGGCTATCCC GCGCTTGCCG AAGAGTTCGA GATGGTGGCC CACGAGGTGA AGGCCGGCAA GGAGCGCGTC GCCGTTCTCA AGGACATGGC CGAGCGGGTG GGCATCCCCG ACGTGTCCTC CTTCGTCACC ACTCTGATCC AGTCGGCCAC CTTCGGCACC TCCATCGCCG AGGCGCTTCG CGTCTATTCC TCCGAGATGC GCGACAAACG CGTCATGAGG GCCGAGGAAA AGGCAAACAC CTTGCCGACC AAGCTGACCC TCGGCACAAT GCTGCTCACC GTGCCGCCGC TGATGCTGAT CCTGATCGGC CCTTCGGTCT ATGGCATCGC CACGCAGCTG GGCGGACAGT GA
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Protein sequence | MDLLNRLEGY LIDSLGPLGP LMAMGMLGIL LIALTLPVML KKRDEPFDRI KAQRTVGAAP VSQALRRSSG TEKLDRFANL LEPKTAEELS ASRLKMMRAG YRSKGAVRAF HAAQFALGVG FLVLGVLYAL LASATAPLTM QQMVIYTLLP GAIGYYLPVY WIKRRAQERH DQIVAGFPDA LDMMLVCVEA GQSLDQSILR VARESASGYP ALAEEFEMVA HEVKAGKERV AVLKDMAERV GIPDVSSFVT TLIQSATFGT SIAEALRVYS SEMRDKRVMR AEEKANTLPT KLTLGTMLLT VPPLMLILIG PSVYGIATQL GGQ
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