Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0175 |
Symbol | |
ID | 5082582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 171577 |
End bp | 172221 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640481730 |
Product | hypothetical protein |
Protein accession | YP_001166390 |
Protein GI | 146276231 |
COG category | [S] Function unknown |
COG ID | [COG3152] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCAAG GACGAGTGAT CTTTTTCGAC AACGCCACCT CGACCGGCCG GATTTCCGGC GCGGACGGCC ATCGCTATGA CTTCAGCCAG CAGGACCTGA AGCAGCCGGT CCGGCCAGCG GTGGGAGCGG AAGTCGATTT CGAGCCGCGG AACGGCGCCG CGCGCGACAT CTATGTGATC GGCGGGGCCG CGGCTGCCCA TCAAGGCAGT TACGTGGGCA AGGTCGAACC TGATCTGGGA TTGTTCGGCT ATGGCTGGCG AGCGGTCACT GCCAAGTACG CAGCTTTCAG TGGTCGTGCG CGCCGCAAGG AAGCCTGGGG GTTTGGCGTG ATCTACTTCC TGCTTCTGCT GATCCCGTCG CTGTTGTTCA TTCCTGCGGC GGCAACCGGG TCAGACGAGG CAATGACGCT GCCTCTGGTG ATCTTGGGTA TTGTCTTTCT CGCGCTGATC GTCCCGTCCT GGGCGGTGAA CTTTCGGCGG CTGCACGACC TCGGCCAGCC CGGGTGGATC ATCTTCGTTG TGACGGCGAT CAGCCTTATT CCCTACGTGG GCGCCTTGAT TGCCCTGATC GCGACTGTAT TGCTTCTGGT CGTGGAGGGC CAGCCGCACG AGAACAAGTA TGGCGTGCCG GTGAAGCGCG CCTGA
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Protein sequence | MMQGRVIFFD NATSTGRISG ADGHRYDFSQ QDLKQPVRPA VGAEVDFEPR NGAARDIYVI GGAAAAHQGS YVGKVEPDLG LFGYGWRAVT AKYAAFSGRA RRKEAWGFGV IYFLLLLIPS LLFIPAAATG SDEAMTLPLV ILGIVFLALI VPSWAVNFRR LHDLGQPGWI IFVVTAISLI PYVGALIALI ATVLLLVVEG QPHENKYGVP VKRA
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