Gene Rsph17025_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0087 
Symbol 
ID5082674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp94887 
End bp95258 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content65% 
IMG OID640481641 
Producthypothetical protein 
Protein accessionYP_001166303 
Protein GI146276144 
COG category[C] Energy production and conversion 
COG ID[COG2142] Succinate dehydrogenase, hydrophobic anchor subunit 
TIGRFAM ID[TIGR02968] succinate dehydrogenase, hydrophobic membrane anchor protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.5065 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTCA TCACCGCCCG CAAGCGCGCC GAGGGCATGG GCGCCGCCCA CCACGGCACC 
GACCGCCACT GGTACATGAT CGTCTCGGCG GTGGGTCTCG CGGTCCTGAT CCCGATCTTC
GTCTATGTCG TCGGCAATGC CATCGGCGAA GGCCGTGAGC GCGTGCTCGA GATCTTCTCG
CATCCGTTCA ACGCGATCCT GTCGGGACTG GTGCTGTTCT TCGGCATGCG CCACTTCGCC
GAAGGTTCGA CCATGATGAT CGAGGACTAC TGGCAGGGCG TGCCGCGCCG CCTGCTGGTG
ATCTGCGCGC AATCCTTCGC CTATGGCGTG GCGGCGATCG GGCTGTTCGC CCTCGCCAAG
ATCGCCCTCT GA
 
Protein sequence
MRFITARKRA EGMGAAHHGT DRHWYMIVSA VGLAVLIPIF VYVVGNAIGE GRERVLEIFS 
HPFNAILSGL VLFFGMRHFA EGSTMMIEDY WQGVPRRLLV ICAQSFAYGV AAIGLFALAK
IAL