Gene Rsph17025_0059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0059 
Symbol 
ID5082468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp66891 
End bp68078 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content74% 
IMG OID640481614 
Product3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein 
Protein accessionYP_001166276 
Protein GI146276117 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1519] 3-deoxy-D-manno-octulosonic-acid transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.197624 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACCG CCTTCGGCCT CCCGTTCGGG ACTGCCCTGC GGCGTGAGCC CGCCGAGGGC 
CCGGTCCGAC CCCAGCGCCC TCTTGGCAAG CTGGTCTGGC TCCATGCGCC CTCGCGCGAG
TCGGCGCGGC CGATGGCCGA ACTCGGACGC CGGATCATCC TCGACGAGGG GTTTCCGGTC
CTGCTGACCA CCCACGCCCC GGTGAGTTCG GGCGGCATCC TGATCGTGCA GACCCCGCCG
CCCGACACGC AGGCCGCGGC GGCGGACTTC CTGGAACACT GGCGGCCCGA TGCGGCCTTC
ATGGCCGAGG GCGAACTGAG GCCTTCCCTG ATCCAGGCCG CGTCGGACCG GGGCGTGCCG
CTGGCGCTCG TCGATGGCGT GGCGCCGCGC ATCCTGCCCG GGCGCGAAAG CTGGTGGCCG
GGGCAGATGC GCAACCTGCT CGGGCGGTTC AGCCACATTT TCACCGTGGA CGAGGCGGCC
GCGCGCGCCT TTCGCAAGGC CGGAAGCCCG ACACAGGTGA CGCAGGTCGC CGGGCGGCTG
GAAGAAGGCA GCCTCGCGCT GCCCTGCACC GAGGCCGAGC GGGCGGCGAT GGCCCGGCTG
CTCGCCACGC GGCAGGTCTG GCTTGCGGCG GGCCTTCCGA TCCAGGAGGA GGCCGCGGTG
ATCGGGGCGC ATCATGCGGC GCTGAAGCTC GCCCACCGGA TGCTTCTCAT CGTCGTTCCG
CAGGAGCCCG ACCGCGCGGG CCCCCTCGCC GAGCGGTTCG AGGCCGAAGG CTGGAAGGTC
GCCCGCCGCG CCGCCGACGA AGAGCCGGAT GCCGAGACCG AGGTCTTCGT CGCCGATGGT
GCGGCCGAAC TCGGCCTCTG GTATCGGCTG GCGCAGGTCA CCTGGCTGGG CGGCAGCCTC
AGCACCGGCT GCGTGCTCGA CCCGCTCGAG GCGGCCTCGC TCGGATCGGC GCTGATCCAC
GGGCCGCGTG CCGGATCGCA TGGCGTGACG CTGGGCCGGC TGACGGCGGC GCGGGCCTCG
ATGACGGTCG ATACGGCGCG CGATCTTGCC GAGGCGCTGG CCGACCTGCT CGCGCCCGAC
CGGGTGGCGC GGCTGGCCCA TGCGGGCTGG GCCGTGGCCT CGGAAGGCAC CGAAGTCACC
GACCGGGTGG TGGCGCTGGC CGGCCGCCTT GTAGAGAGAG AGCCCTGA
 
Protein sequence
MATAFGLPFG TALRREPAEG PVRPQRPLGK LVWLHAPSRE SARPMAELGR RIILDEGFPV 
LLTTHAPVSS GGILIVQTPP PDTQAAAADF LEHWRPDAAF MAEGELRPSL IQAASDRGVP
LALVDGVAPR ILPGRESWWP GQMRNLLGRF SHIFTVDEAA ARAFRKAGSP TQVTQVAGRL
EEGSLALPCT EAERAAMARL LATRQVWLAA GLPIQEEAAV IGAHHAALKL AHRMLLIVVP
QEPDRAGPLA ERFEAEGWKV ARRAADEEPD AETEVFVADG AAELGLWYRL AQVTWLGGSL
STGCVLDPLE AASLGSALIH GPRAGSHGVT LGRLTAARAS MTVDTARDLA EALADLLAPD
RVARLAHAGW AVASEGTEVT DRVVALAGRL VEREP