Gene Rsph17025_0041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0041 
Symbol 
ID5082450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp49673 
End bp50851 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content67% 
IMG OID640481596 
Productradical SAM protein 
Protein accessionYP_001166258 
Protein GI146276099 
COG category[R] General function prediction only 
COG ID[COG0820] Predicted Fe-S-cluster redox enzyme 
TIGRFAM ID[TIGR00048] radical SAM enzyme, Cfr family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA CCGCTCCGAT CACCCAGGAC GTGATGACCC TTCCGCGCAA GCTGCCCGAG 
GGCGGCCCGC TCAACATCGT GGGCCTCACG CGCGAAGAAC TGATGGCGGC CCTCGTCGCC
GCCGGCACGC CCGAGCGGCA GGCCCGGATG CGCATGGGGC AGGTCTGGCA GTGGGTCTAC
CACTGGGGCG TGCGCGACTT TGCGCAGATG ACGAACCTCG CCAAGGACTA CCGCGCGCTG
CTGGCCGAGC ATTTCGCCAT CGTCCTGCCC GAGGTGGTGA CCCGGCAGAT CTCGGCGGAC
GGCACGCGGA AATATCTCAT CCGGATCGCG GGCGGGCACG AGGTCGAGAC CGTCTATATC
CCCGAGGAAG GCCGCGGCAC GCTCTGCGTT TCCTCTCAGG TGGGCTGCAC GCTGACCTGC
TCCTTCTGCC ACACCGGCAC GCAGAAGCTG GTGCGCAACC TGACGGCGGG CGAGATCGTG
GGGCAGGTGA TGCTGGTGCG CGACGATCTC GGCGAATGGC CCGAGCGGGG CGCACCCAAG
GACGAGACGC GGCTTGTGTC GAACCTCGTG CTGATGGGCA TGGGCGAGCC TCTCTACAAT
TTCGAGAATG TTCGCAACGC GATGAAGGTG GTGATGGACG GCGAGGGCCT CTCGCTCTCG
CGTCGGCGGA TCACGCTCTC GACCTCGGGC GTCGTGCCCG AGATCGCGCG CACGGCCGAA
GAGATCGGCT GCCAGCTTGC CATCTCCTTC CACGCCACGA CCGACGAGGT GCGCGACATT
CTCGTTCCGA TCAACAAGCG CTGGAACATC CGCACGCTCC TCGACAGCCT GCGCGACTAT
CCGCGGCTGT CGAACTCCGA GCGGATCACC TTCGAATATG TGATGCTCGA CGGGATCAAC
GACAGCGACG CCGACGCGCG GCGGCTGGTG AAGCTGATCT CGGGCATCCC CTCCAAGATC
AACCTGATCC CCTTCAACGA ATGGCCGGGC GCGCCCTACC GCCGCTCGAC GCCCGAGCGG
ATCGCGGCCT TCGCCGACAT CATCTACAAG GCGGGCTATG CCTCGCCGAT CCGCACCCCG
CGCGGCGAGG ACATCATGGC GGCCTGCGGC CAGCTCAAGT CCGCGACCGA GCGCGCCCGC
AAGAGCCGGG CCCAGATCGC CGCCGAAACC GGCCTCTGA
 
Protein sequence
MTATAPITQD VMTLPRKLPE GGPLNIVGLT REELMAALVA AGTPERQARM RMGQVWQWVY 
HWGVRDFAQM TNLAKDYRAL LAEHFAIVLP EVVTRQISAD GTRKYLIRIA GGHEVETVYI
PEEGRGTLCV SSQVGCTLTC SFCHTGTQKL VRNLTAGEIV GQVMLVRDDL GEWPERGAPK
DETRLVSNLV LMGMGEPLYN FENVRNAMKV VMDGEGLSLS RRRITLSTSG VVPEIARTAE
EIGCQLAISF HATTDEVRDI LVPINKRWNI RTLLDSLRDY PRLSNSERIT FEYVMLDGIN
DSDADARRLV KLISGIPSKI NLIPFNEWPG APYRRSTPER IAAFADIIYK AGYASPIRTP
RGEDIMAACG QLKSATERAR KSRAQIAAET GL