Gene Rsph17025_0031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0031 
Symbol 
ID5082292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp40365 
End bp41537 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content71% 
IMG OID640481586 
Productmajor facilitator transporter 
Protein accessionYP_001166248 
Protein GI146276089 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCCG GAATTGCCTG CCTTGTGCTG GCCTATGTGC TGAGCCAGTT CTACCGCGCC 
TTCCTGGCGG TGCTGACGCC CGTCCTGAAG ACCGAGCTGG GCGCGACGTC CGAGGATCTG
GCGGCGGCCT CGGGCATCTG GTTCCTGGCC TTCGCGCTGA TGCAGTTCCC GGTGGGCTGG
GCGCTGGACC GTGTGGGGCC GCGGCTCACC TCGATGGTGC TGCTGGGGGC GGGCGGCGCG
GGCGGCGCGC TGGTTTTCGG CATGGCCCAG GGGCCGGCGG CGATCCTCGC CGCGATGGCG
CTGATCGGGA TCGGCTGCTC GCCGGTGCTG ATGGCCAGCT ACTACATCTT TGCGCGCAGC
TACAGCCCGG CGGTCTTCGG CACGCTTGCC GCCGCCGTGG TGGGGATCGG AAGCCTCGGC
AACATCGCGG GGTCGGTTCC GCTCGCCTGG GCCGTCGAGG CCTTCGGCTG GCGCGAGACG
CTGTTTGCGC TGGCGGGCGT GACCCTGGGG GTTGCGGGGG CCATCGGGCT TCTGGTGCGC
GATCCGGGCC GCATCGAAGG GTCTGCGAAC GGGTCGCTCT GGCAGCTTCT GCGGATGCCG
GCGCTCTGGC CCGTGCTGAT CATGATGGTC GTCTGCTATG CCCCGGCGGC GGGGCTGCGG
GGGCTGTGGA TCGGACCCTA TTACGCCGAT GTCTTCGGCG CCTCGGCGGT CGAGATCGGG
CGGGCGACGC TGGTCATGGG GCTGGCCATG GTGGCGGGCA GCTTTGCCTA CGGGCCACTC
GACCGGCTGC TCGGCACGCG CAAGGGGCTG ATCCTTGGCG GAAACCTGCT GACGGCGCTG
TGCCTGGTCG CGCTCTGGAT CTGGCCTGTG GCGGGCGGCT GGACGGGGCT GCTGCTCTTT
GCGGGGATCG GGCTCTTTGG CGCCTCCTTC CCGATGGTGA TCGCCCACGG GCGCGCCTTC
GTGCCGCCGC ATCTGATGGG GCGGGGGGTG ACGCTGCTGA ACTTCTTCGG GATCGCCTCG
CCCGGGATCA TGCAGTTCGC GACGGGCGCG GTGCACGGCG CGGTGGCGCC GGTGCCGCCC
GAGGCGCCCT ATGAGGCCCT CTTCCTCTTC TTCGCGCTCT TCATCCTGGC GGGCTGCGCC
GTCTATGCCT TCAGCCGCGA CCGGACGGAC TGA
 
Protein sequence
MRAGIACLVL AYVLSQFYRA FLAVLTPVLK TELGATSEDL AAASGIWFLA FALMQFPVGW 
ALDRVGPRLT SMVLLGAGGA GGALVFGMAQ GPAAILAAMA LIGIGCSPVL MASYYIFARS
YSPAVFGTLA AAVVGIGSLG NIAGSVPLAW AVEAFGWRET LFALAGVTLG VAGAIGLLVR
DPGRIEGSAN GSLWQLLRMP ALWPVLIMMV VCYAPAAGLR GLWIGPYYAD VFGASAVEIG
RATLVMGLAM VAGSFAYGPL DRLLGTRKGL ILGGNLLTAL CLVALWIWPV AGGWTGLLLF
AGIGLFGASF PMVIAHGRAF VPPHLMGRGV TLLNFFGIAS PGIMQFATGA VHGAVAPVPP
EAPYEALFLF FALFILAGCA VYAFSRDRTD