| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0029 |
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| Symbol | |
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| ID | 5082290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 37089 |
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| End bp | 38699 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640481584 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_001166246 |
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| Protein GI | 146276087 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGACT GGTGGCGCGG CTCGGTGACC TATCAGATCT ATCCACGTTC GTTCCAGGAC
TCGAACGGCG ACGGTGTGGG CGACCTGCGC GGCATTCACG AGCGGCTCGA TCATGTGGCC
TGGCTCGGCG CCGACGCGAT CTGGCTTTCC CCGTTCTTTC CCTCGCCCAT GGACGACATG
GGCTACGACG TCTCGGACTA TACCGGCATC GACCCGCTCT TCGGCCGGAT GGAGGATTTC
GACGCGCTTC TCGCCCGGGC TCACGAGCTG GGCCTCAAGG TCATCATCGA CCAGGTCCTC
AGCCACTCCT CCTCGCGACA TCCCTTCTTT CAGGAAAGCC GGCAGAGCCG CGACAATCCG
AAGTCGGGCT GGTATGTCTG GGCGGATCCG CAGCCCGACG GCAGCCCGCC GAACAACTGG
CTCTCGGTCT TCGGCGGCTC CGCCTGGGAG TGGGACGCGC AGCGGCGGCA ATATTACCTG
CACAATTTCC TGACCACCCA GCCCGACTTC AACTTTCACA ACCCCGAGGT GCAGGACTGG
CTGCTCGAGC AGATGCGCTT CTGGCTCGAT CGCGGCGTGG ACGGCTTCCG CCTCGACACG
GTGAATTTCT ACTTCCACGA CGCCGACCTC AGGTCGAATC GGCCGAACCC GCAGAACGGA
CCCGTCCCGC CGGTCAATCC CTACGACATG CAGGACCACG CCTTCTCGAA ATCCCGTGAC
GAGAACATCG CCTTCCTGCT CAGGATGCGG AAGCTTCTCG ACGAATATCC CGACCGGACC
ATGGTGGGCG AGGTGGCCGA CGGGCTTCGC GGGCTGTCGA TCATCGCCGA ATACACCAGC
GGGAACGACC GGCTCCACAT GGCCTACACG TTCGAGATGC TCTCGCGCAC CTTCACCGCC
GGGCATTTCC GCAGCCGGAT CGAGGAGTTC TTCGCCACTG CCCCGCACGG CTGGCCCTGC
TGGGCCTTTT CCAACCATGA CGTCGTGCGC CACGTCACCC GCTGGGCCGG GCACGGCGCC
TCCGACGATG TGGCGCGGCT TGCGGCGGCG ATGCTGCTGT CGTTCGAGGG GTCGGTCAGC
CTCTATCAGG GCGAGGAACT CGGCCAGACC GAGACCGAGC TTCTCTACGA CGAACTCACC
GACCCGCCCG GCCTGCGCTT CTGGCCCGAG GACAAGGGCC GCGACGGATG CCGGACGCCG
ATGGTGTGGG ACGGTGGGCC GCACGGAGGC TTCACCTCCG GCAAGCCCTG GCTGCCCGTG
AAGCCGCCGC AGCTTGCGCG GAACGTGGCC GCGCAAAAGG GCGTGGCGGG CTCGGTGCTC
GAGACCTACC GCGCGCTCCT GCAGTTCCGC CGGAGCGAAC CCGCCCTCAT CCGGGGGAAG
AGCCACTTCT TCGACCTGCC CGAGCCCGTC CTCGGCTTCA CCCGCAGCCA TGAGGGTCGC
ACCCTTGCCT GCCTGTTCAA TCTCGACACG GCGCCCGCAA CCCTGACCAT CCCCGGCCAC
GGCGGGATCG TGGGGCCCTC GCAGGCGGCG CGGATCGAGG GGGATCGCCT GACGCTGGGC
GCGAACGGCT ACGCCTTCCT GCCGGTGCCC GAAACCGCCG TCGTCAGCTG A
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| Protein sequence | MSDWWRGSVT YQIYPRSFQD SNGDGVGDLR GIHERLDHVA WLGADAIWLS PFFPSPMDDM
GYDVSDYTGI DPLFGRMEDF DALLARAHEL GLKVIIDQVL SHSSSRHPFF QESRQSRDNP
KSGWYVWADP QPDGSPPNNW LSVFGGSAWE WDAQRRQYYL HNFLTTQPDF NFHNPEVQDW
LLEQMRFWLD RGVDGFRLDT VNFYFHDADL RSNRPNPQNG PVPPVNPYDM QDHAFSKSRD
ENIAFLLRMR KLLDEYPDRT MVGEVADGLR GLSIIAEYTS GNDRLHMAYT FEMLSRTFTA
GHFRSRIEEF FATAPHGWPC WAFSNHDVVR HVTRWAGHGA SDDVARLAAA MLLSFEGSVS
LYQGEELGQT ETELLYDELT DPPGLRFWPE DKGRDGCRTP MVWDGGPHGG FTSGKPWLPV
KPPQLARNVA AQKGVAGSVL ETYRALLQFR RSEPALIRGK SHFFDLPEPV LGFTRSHEGR
TLACLFNLDT APATLTIPGH GGIVGPSQAA RIEGDRLTLG ANGYAFLPVP ETAVVS
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