| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0004 |
|---|
| Symbol | recF |
|---|
| ID | 5084063 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 3530 |
|---|
| End bp | 4621 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640481559 |
|---|
| Product | recombination protein F |
|---|
| Protein accession | YP_001166221 |
|---|
| Protein GI | 146276062 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
|---|
| TIGRFAM ID | [TIGR00611] recF protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00000368793 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGGGC TTGCCGTCAC ATCCCTCGCT CTCTCGCACT TCCGCTCGCA TCGCGCGGCG
CGGATGGCGT TCGACGGGCG GCCGGTGGCC TTCGTGGGCG CGAATGGGGC GGGCAAGACG
AACGTGCTCG AGGCGATCTC GCTGCTTTCT CCCGGGCGGG GGTTGCGGCG CGCGGCGGCC
GACGAGATCG CGCGGCGGCC CGAGGCGCTG GGATGGAAGG TGGCCGCCGC CGTGCGGGGG
CTGCATTCCG ACCATGAGGT CGAGACCTGG GCCGAGGGCG GCGGGGCGCG GCAGGTGCGC
ATCGACGGCA AGGCCGCGAC GCAGGTGATG CTGGGGCGGC TCTTGCGCAT CGTCTGGCTG
GTGCCCGCCA TGGACCGGCT CTGGACCGAG GCGGCGGAGG GACGGCGGCG GTTTCTCGAC
CGGGTGGCGA TGAGTTTCGC GCCCGACCAT GCCGAGGCGG TGCTCGATTA CGAGAAGGCG
ATGCGCGAGC GGAACCGGCT TCTGAAGGAG CAGGTGGCCG ATGCCCATTG GCATGCGGCG
CTCGAGGGGC GGATGGCCGA GGCCGCGCGG GTGATCCGGG CGCATCGGGA GGCGGCGGTG
GCACGGTTGA TGGCGGCGCA GGGGGCGGCC GAGACGGCCT TTCCGCGGGC CATGCTGTCG
GTCGCCTCGG AGGATCCCGA GGATCTGGCC GCGGCCTGGG CCGAGGGGCG GCGGCGGGAC
ATGGCGGCGG GGCGGACGCT GCTGGGGCCG CACCGCGCCG ATCTGACGGC GATCTATGCG
GCCAAAGGCG TTCCGGCAGC GCAATGTTCA ACGGGCGAGC AGAAGGCGCT TCTCATCTCG
CTGGTCCTTG CCAATGGGCG CGCGCTGGCC GAGGATCTGG GGGCGGCGCC GATCCTGCTG
CTCGACGAGG TGGCGGCCCA TCTCGATGAG GGGCGACGGG CGGCCCTGTT CGACGAGATC
TGCGCGCTCG GGGCGCAGGC CTACATGACA GGCACGGGGC CGGAGCTGTT CACCGCGCTC
GGGGGGCGGG CGCAGAGGAT CGAGGTGACG GAGGCCGAGG GGCTTTCGCA GACAAGGGAG
ATGTCGCCAT GA
|
|---|
| Protein sequence | MRGLAVTSLA LSHFRSHRAA RMAFDGRPVA FVGANGAGKT NVLEAISLLS PGRGLRRAAA
DEIARRPEAL GWKVAAAVRG LHSDHEVETW AEGGGARQVR IDGKAATQVM LGRLLRIVWL
VPAMDRLWTE AAEGRRRFLD RVAMSFAPDH AEAVLDYEKA MRERNRLLKE QVADAHWHAA
LEGRMAEAAR VIRAHREAAV ARLMAAQGAA ETAFPRAMLS VASEDPEDLA AAWAEGRRRD
MAAGRTLLGP HRADLTAIYA AKGVPAAQCS TGEQKALLIS LVLANGRALA EDLGAAPILL
LDEVAAHLDE GRRAALFDEI CALGAQAYMT GTGPELFTAL GGRAQRIEVT EAEGLSQTRE
MSP
|
|---|
| |