| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_B0006 |
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| Symbol | |
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| ID | 3833387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007641 |
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| Strand | - |
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| Start bp | 5259 |
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| End bp | 6218 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637824025 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_425042 |
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| Protein GI | 83582736 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.312436 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAGT ACTTGATCCT TGGCGGATGT GGCTTCATCG GTCGCCACGT CGCCCTGGCC
TTGGCCCGGC GGGGAGAGAG CGTGGTCGTA GCCGATGTCG CCGCCCCTCC TGCGGAATTG
GCGAATGTGC CGGTCACCTT TCGCCAGGTC GTCCCGGGTC AAACCGATTG GCAGGCGCTG
ACCGAGGATT GTGACGTTAT CCATCACTAC GCTTGGAGCA CGATTCCTCA AACCGCGAAC
GATGATCCCA TTCGCGATCT GGATGATAAT GTCCGCACTA CCTTGGGTCT TCTCGATGTG
TTGCGCCATC AAGGGAAGAA GCGCCTGATT TTCGCGAGTT CCGGCGGCAC GGTTTATGGT
CGGCTCAAGC GTATTCCGGC CGAAGAGCAC CATTCCCTGG CCCCGATCAC CGCCTACGGC
GCTTCGAAAG CCTGTGTTGA GTTGTATCTG GGGTTTTATC GAGCCCATCA CGGGATGGAT
TGCCGGGTGG CTCGAATCTC CAATCCTTTC GGGGCGGGGC AAGACGCTCG CCGAAAGCAG
CAGGGGGCGG CGAGCGCCTT TTTGTTCAAA GCCCTGGCTG GCGAAGAAAT TACAATCTGG
GGCGATGGAA GCGTTATCCG CGATTACATC CATATTGCCG ATCTGACCCG CGGCTTGATC
GCCTTATCTG ATGCTTCCCT CGCAGATCAT CATGATCTTC CCATCTATAA CCTGGGGAGC
GGGGTCGGGA TTTCACTTAA TGAAATCGTT GAAACTCTGA GAAATCGCTT AGGTCTTACA
GCAACGGTTA ATTATCTGCC GTCGCGTAAT TTTGATATTC CGGCTAGTAT ACTTGATATC
AGAAAGTCGA AAGACTTGCT TGAGTGGTCT CCGCAGATGT CTTTTGCTGA AGGATATTCA
TTGATGTTCG ATGATTTAAG AAAAAACAAA AAATATTTTT CTACACTTCC AATTTCTTAA
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| Protein sequence | MTQYLILGGC GFIGRHVALA LARRGESVVV ADVAAPPAEL ANVPVTFRQV VPGQTDWQAL
TEDCDVIHHY AWSTIPQTAN DDPIRDLDDN VRTTLGLLDV LRHQGKKRLI FASSGGTVYG
RLKRIPAEEH HSLAPITAYG ASKACVELYL GFYRAHHGMD CRVARISNPF GAGQDARRKQ
QGAASAFLFK ALAGEEITIW GDGSVIRDYI HIADLTRGLI ALSDASLADH HDLPIYNLGS
GVGISLNEIV ETLRNRLGLT ATVNYLPSRN FDIPASILDI RKSKDLLEWS PQMSFAEGYS
LMFDDLRKNK KYFSTLPIS
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