Gene Rru_A3619 details

Gene Information

• Locus tag: Rru_A3619
• Symbol: rho
• ID: 3837075
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodospirillum rubrum ATCC 11170
• Kingdom: Bacteria
• Replicon accession: NC_007643
• Strand: +
• Start bp: 4157912
• End bp: 4159168
• Gene Length: 1257 bp
• Protein Length: 418 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637827743
• Product: transcription termination factor Rho
• Protein accession: YP_428700
• Protein GI: 83594948
• COG category: [K] Transcription
• COG ID: [COG1158] Transcription termination factor
• TIGRFAM ID: [TIGR00767] transcription termination factor Rho

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCACCTTC AGGAACTGAA AAGCAAATCT CCGGCCGATC TTTTGGCTTT CGCCGAAGAA 
CTGGAGATCG AGAACGCGAG CAACCTGCGC AAGCAGGACA TGATGTTCGC GATCTTGAAG 
CAACTCGCCG AAAATGATAC CGCAATCTTT GGCGAGGGGG TTCTGGAAAT TCTTCAGGAC 
GGCTTCGGCT TCCTGCGGGC GCCCGAGTCC AATTACCTGC CCGGGCCCGA TGATATTTAT 
GTCTCGCCCA GTCAGGTCCG TCGCTTCGGT CTGCGCACCG GCGATACGGT CGAGGGCCAG 
ATCCGCGCCC CCAAGGATGG CGAGCGCTAT TTCGCCCTGC TCAAGGTCAA TAAGATCAAC 
TTTGAGGCGC CGGAATCCGT CCGTCACCGC ATCAATTTCG ACAATCTGAC GCCGCTCTAT 
CCCGATGAGC GGTTGAAGCT GGAAATCGAC GATCCGACCC GCAAGGAATT CACCACCCGG 
ATCATCGATC TCATCACGCC GCTGGGCAAG GGCCAGCGCG CCCTGATCGT GGCGCCGCCG 
CGCACCGGTA AAACGGTGAT GCTGCAGAAC GTCGCCCATG CGATTTCGGC CAATAATCCG 
GAAGTCTATC TGATCGTGCT GCTCATCGAC GAGCGGCCCG AGGAAGTGAC CGACATGGCT 
CGCTCGGTGA ACGGCGAGGT GGTCAGTTCC ACCTTCGACG AACCGGCCTC GCGCCACGTT 
CAGGTCGCCG AGATGGTGAT CGAAAAGGCC AAGCGCCTGG TCGAGCACAA ACGCGACGTC 
GTCATCCTTC TTGATTCGAT CACCCGTCTC GCCCGCGCCT ATAACACCGT GGTGCCCAGT 
TCGGGCAAGG TGCTGACCGG TGGTGTCGAC GCCAATGCCC TGCAGCGCCC CAAGCGCTTC 
TTCGGCGCCG CCCGTAATAT CGAAGAGGGC GGATCGCTGA CCATCATCGC CACGGCGCTG 
ATCGATACCG GATCGCGCAT GGACGAGGTG ATCTTCGAAG AGTTCAAGGG GACCGGTAAC 
TCGGAAATCA TCCTGGACCG CAAGCTCGCC GACCGCCGCG TCTTCCCGTC GATCGATATC 
GCCCGCTCGG GCACCCGGAA GGAAGAACTT CTCGTCCGCA AGGATGTGCT GTCGAAGATG 
TGGGTGCTGC GCCGGATCCT CTCGCCGATG GGCGTTCAGG ACGCCATGGA ATTCCTTCTT 
GGCAAGATGA AGGAAACCAA GAACAACGAC GATTTCTTCG ACGCGATGAA TTCCTGA 

 

Protein sequence

MHLQELKSKS PADLLAFAEE LEIENASNLR KQDMMFAILK QLAENDTAIF GEGVLEILQD 
GFGFLRAPES NYLPGPDDIY VSPSQVRRFG LRTGDTVEGQ IRAPKDGERY FALLKVNKIN 
FEAPESVRHR INFDNLTPLY PDERLKLEID DPTRKEFTTR IIDLITPLGK GQRALIVAPP 
RTGKTVMLQN VAHAISANNP EVYLIVLLID ERPEEVTDMA RSVNGEVVSS TFDEPASRHV 
QVAEMVIEKA KRLVEHKRDV VILLDSITRL ARAYNTVVPS SGKVLTGGVD ANALQRPKRF 
FGAARNIEEG GSLTIIATAL IDTGSRMDEV IFEEFKGTGN SEIILDRKLA DRRVFPSIDI 
ARSGTRKEEL LVRKDVLSKM WVLRRILSPM GVQDAMEFLL GKMKETKNND DFFDAMNS