Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A3538 |
Symbol | |
ID | 3836993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 4068557 |
End bp | 4070098 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637827661 |
Product | virulence factor MVIN-like |
Protein accession | YP_428619 |
Protein GI | 83594867 |
COG category | [R] General function prediction only |
COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.32091 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCTGC TGCGCTCGAT TTCCACCGTG GGCGGTTACA CGCTGCTCTC GCGTATCACC GGCTTCGTCC GCGACATCCT GATCGCCCGC TATCTGGGGG CGGGAACGCT GTCGGACGCC TTTTTCGTCG CCTTCCGCTT CCCCAATCTG TTCCGCCAGA TGTTCGCCGA AGGGGCCTTC ACCGCCGCCT TCGTGCCGAT CTTCGCCGGA GTCTCGGAAA CCGAGGGCCG CGAGGCCGCC CATCGCTTCG CCGAGCAGGC CTATACGGTG CTGGCGCTGA TCCTGGTGGT GCTGGTCGCG GGCATGGAGG TGGTGATGCC CTGGGCGATG TATGTGCTAG CGCCCGGCTT CGATGACATC GCCGGCAAGA TGGAGCTGAC CACCGAGCTG TCGCGGCTGG CCTTCCCCTA TCTTTTCTTC ATTTCGCTGA CGGCGCTGCA GGCCGGCGTG CTGAATTCCA TGGGGCGCTT CGCCGTCGCC GCCGCCGCGC CGATCCTGCT CAATCTCACC CAGATCGTCG CCCTGCTCGG CTTCGCCGAT CTTGGCGAGA CCCCGGGCCA CGTTCTGGCC TGGAGCGTGT CGCTGGCCGG CGTGCTGCAG TTCCTGTGGC TTTATGTTCA TTGCCGGCGG GCGGGGATGC CGATCCATTT CACCCGCCCC CGGCTGTCGC CCAAGGTCCG CCAGCTGGGC CGGCGGGTGC TGCCGGTGGT GTTCGGTTCG GGGCTTTATC AGGTCAATCT GCTGGTCGGC ACCGTTCTCG CCTCGATGGT CAGCGATGGC GCGCTCAGTT ACCTCTATTA CGCCGACCGC CTGACCCAAC TGCCGTTGGG CGTGGTTGGC GTGGCGGTGG GAACGGTGCT GCTGCCCTTG TTGTCGCGCC AGATCAAGGC CGGCAATGAA GAGGCGGCGC GGTGGAATCA GAACCGCGCC CTGGAGTTCT CGCTGCTGCT GACCCTGCCG GCGGCCGCCG CCCTGATCGC CATCGCCCAT CCGATCATCA CCGTCTTGTT CGAGCGCGGC GCCTTCACCG CCAGCGACAG CCATGCGACG TCCCAGGCGA TGATCGCCTT CGCCGCCGGA TTGCCGGCCT ATGTGCTGAT CAAGGTGTTC TCGCCGGCCT TCTACGCCCG CGACGATACG GCGACCCCGG TCAAGGTGGC GGCGGCGTCG ATGCTGACCA ATATCGTGCT CAATCTGTCG CTGATCTGGA CGCTTGGCTA TCTGGGCATC GCCATCGGCG CGGCGCTTTC AAGCTGGATG AACGCCCTGC TGCTTGGCGT CATCCTCCAT CGGCGCGGCA AGCTCAATCT TGATCAGCGC ATGATCTCGC GCCTGCCGCG CATGGTGCTG GCGACGGCGG CGATGGTCGG GGTGCTGCTG GTGCTGGCGG CCCGGTTTGA CGGACCCTTG GCCGATGGTC AGGTGCTGCG CTCGCTGACC CTGGCCGGCA TCGTCGTCGC CGGCGCCACC ACCTATGGCC TAGCCGTTTT CCTCTTCCGC GCGGCGCGGA TCGCCGACTT CCGGGGGATG GGGCGGCGCT AG
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Protein sequence | MSLLRSISTV GGYTLLSRIT GFVRDILIAR YLGAGTLSDA FFVAFRFPNL FRQMFAEGAF TAAFVPIFAG VSETEGREAA HRFAEQAYTV LALILVVLVA GMEVVMPWAM YVLAPGFDDI AGKMELTTEL SRLAFPYLFF ISLTALQAGV LNSMGRFAVA AAAPILLNLT QIVALLGFAD LGETPGHVLA WSVSLAGVLQ FLWLYVHCRR AGMPIHFTRP RLSPKVRQLG RRVLPVVFGS GLYQVNLLVG TVLASMVSDG ALSYLYYADR LTQLPLGVVG VAVGTVLLPL LSRQIKAGNE EAARWNQNRA LEFSLLLTLP AAAALIAIAH PIITVLFERG AFTASDSHAT SQAMIAFAAG LPAYVLIKVF SPAFYARDDT ATPVKVAAAS MLTNIVLNLS LIWTLGYLGI AIGAALSSWM NALLLGVILH RRGKLNLDQR MISRLPRMVL ATAAMVGVLL VLAARFDGPL ADGQVLRSLT LAGIVVAGAT TYGLAVFLFR AARIADFRGM GRR
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