Gene Rru_A3488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A3488 
Symbol 
ID3836941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp4014437 
End bp4014958 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content58% 
IMG OID637827609 
Producttranslation initiation factor 3 
Protein accessionYP_428569 
Protein GI83594817 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0290] Translation initiation factor 3 (IF-3) 
TIGRFAM ID[TIGR00168] translation initiation factor IF-3 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGCTC CGCCGTCCAA GGATGGACCG CGCGCCAACC GGGAAATCAG AATCCCCGAA 
GTCCGTCTCA TCGACGAAAA TGGCGACAAC GTGGGCGTCG TGTCCACGCG GGATGCCTTG
GCCCGTGCCG AAGCGGCCGG TCTCGATCTG GTCGAGATTT CGCCCAACGC CGAGCCGCCC
GTCTGCAAGA TTCTCGATCT AGGTAAGTTT AAGTACGAAG CCCAGAAGAA GAAGAACGAG
GCGAAGAAGA AGCAGAAAGT CATCGAGATC AAGGAAATCA AGCTTCGTCC GAATATCGAC
GAGCATGACT ACGACGTCAA GATGCGCGCC GCCAAGCGTT TCCTGGAGGA GGGCGACAAG
GTCAAAGTGA CCATGCGCTT CCGGGGCCGT GAAATGGCCC ACCAGGATCT GGGCATGAAC
GTGCTGAAGC GGGTCAGCGA GGATGTCGCC GATCTCGCCA AGGTGGAGCA GCATCCCAAG
CTCGAAGGCC GGCAGATGAT CATGGTGATG GCGCCCAAAT AA
 
Protein sequence
MQAPPSKDGP RANREIRIPE VRLIDENGDN VGVVSTRDAL ARAEAAGLDL VEISPNAEPP 
VCKILDLGKF KYEAQKKKNE AKKKQKVIEI KEIKLRPNID EHDYDVKMRA AKRFLEEGDK
VKVTMRFRGR EMAHQDLGMN VLKRVSEDVA DLAKVEQHPK LEGRQMIMVM APK