Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A3488 |
Symbol | |
ID | 3836941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 4014437 |
End bp | 4014958 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637827609 |
Product | translation initiation factor 3 |
Protein accession | YP_428569 |
Protein GI | 83594817 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGGCTC CGCCGTCCAA GGATGGACCG CGCGCCAACC GGGAAATCAG AATCCCCGAA GTCCGTCTCA TCGACGAAAA TGGCGACAAC GTGGGCGTCG TGTCCACGCG GGATGCCTTG GCCCGTGCCG AAGCGGCCGG TCTCGATCTG GTCGAGATTT CGCCCAACGC CGAGCCGCCC GTCTGCAAGA TTCTCGATCT AGGTAAGTTT AAGTACGAAG CCCAGAAGAA GAAGAACGAG GCGAAGAAGA AGCAGAAAGT CATCGAGATC AAGGAAATCA AGCTTCGTCC GAATATCGAC GAGCATGACT ACGACGTCAA GATGCGCGCC GCCAAGCGTT TCCTGGAGGA GGGCGACAAG GTCAAAGTGA CCATGCGCTT CCGGGGCCGT GAAATGGCCC ACCAGGATCT GGGCATGAAC GTGCTGAAGC GGGTCAGCGA GGATGTCGCC GATCTCGCCA AGGTGGAGCA GCATCCCAAG CTCGAAGGCC GGCAGATGAT CATGGTGATG GCGCCCAAAT AA
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Protein sequence | MQAPPSKDGP RANREIRIPE VRLIDENGDN VGVVSTRDAL ARAEAAGLDL VEISPNAEPP VCKILDLGKF KYEAQKKKNE AKKKQKVIEI KEIKLRPNID EHDYDVKMRA AKRFLEEGDK VKVTMRFRGR EMAHQDLGMN VLKRVSEDVA DLAKVEQHPK LEGRQMIMVM APK
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