Gene Rru_A3487 details

Gene Information

• Locus tag: Rru_A3487
• Symbol: thrS
• ID: 3836940
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodospirillum rubrum ATCC 11170
• Kingdom: Bacteria
• Replicon accession: NC_007643
• Strand: +
• Start bp: 4012361
• End bp: 4014292
• Gene Length: 1932 bp
• Protein Length: 643 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637827608
• Product: threonyl-tRNA synthetase
• Protein accession: YP_428568
• Protein GI: 83594816
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0441] Threonyl-tRNA synthetase
• TIGRFAM ID: [TIGR00418] threonyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTCGCCA TTTCCCTGCC CGACGGCAGC GTTCGCAGCT ATGAAGGCCC GGTGACGGGT 
CGCCAGATCG CCGAGGACAT TGGTCCCGGC TTGGCCAAGG CAGCGCTGGC GGTCACTATC 
GACGGGACTA TGAAGGATCT GAGCGTTCCC ATCACTACGG ACGCCAGCGT CAGCCTGATC 
ACGGCGCGCG ACGCCGCCGC CCTGGAGCTG CTGCGCCACG ACGCCGCCCA TGTGATGGCC 
CAGGCGGTGC AAGAATTGTA TCCCGGCACC CAGGTGACCA TCGGTCCGGC GATCGAGAAC 
GGCTTTTATT ACGACTTCGC CCGGGCCGAG CCGTTCACGC CCGAGGATCT GGAGCGCATC 
GAAGAGCGCA TGCGCGAGAT CGTCGGCCGC GATTTGCCGA TCGTCCGCGA GGTCTGGGAG 
CGCGACGAGG CCATCGCCTA TTTCACCAAG CTTGGTGAAA CCTATAAGGC CGAGCTGATC 
ACCGGCCTGC CGGCGAACGA GGATGTCAGC GTCTATCGCC AGGGCGACTG GCTTGACCTG 
TGCCGCGGCC CCCATCTGCC GTCGACGGGC AAGCTCGGCA CCGCCTTCAA GCTGATGAAG 
CTGGCCGGCG CCTATTGGCG GGGCGATTCG CGCAATCCGA TGCTTCAGCG CATCTATGGC 
ACCGCTTGGC CCGATCGCAA GCAGCTTGAC GCCTATCTGA CCATGCTGGC CGAGGCCGAA 
AAGCGCGACC ACCGCCGCGT CGGCCAGGAA ATGGACCTGT TCCACCTTCA GGAAGAGGCC 
CAGGGCGCGG TCTTCTGGCA TCCCAAGGGC TGGACGGTCT ATCGCACCTT GCAAAACTAT 
ATGCGCCGTC GCCTGGATCT GGCCGGCTAC GTCGAGGTCA ACACCCCGAT GCTGGTCGAC 
CGCGCCCTTT GGGAAAAATC CGGGCATTGG GAGAAATTCC GCCAGAACAT GTTCATCAGC 
GAGGCCGAGG ACAAGCTGCT GGCGATGAAG CCGATGAACT GCCCCTGCCA TATCCAGATC 
TTCAAGCAGG GCATCAAAAG CTATCGCGAC CTGCCGCTGC GCATGGCCGA ATTCGGCGCC 
TGTCACCGCA ACGAGGCCTC GGGCGCCCTG CATGGCCTGA TGCGGGTGCG CGCCTTCGTT 
CAAGATGACG CCCATATCTT CTGCACCGAA GATCAGATCG TTTCGGAAAC CCAGGCCTTC 
TGCGATCTTC TGAAAAGCGT CTACCGGGAC CTGGGCTTCA CCGAGATCAA GGTGAAGTTC 
TCCGACCGCC CCGAGGTTCG CGCCGGCAGC GACGAGACCT GGGACAAGGC CGAAGCCGCC 
CTGCGCGAAG CCACCGACGC CGCCGGCCTG GAGTGGACCC TCAACCCGGG CGAGGGCGCC 
TTCTATGGTC CCAAGCTGGA ATTCGTCCTG CGCGACGCCA TCGGCCGCGA CTGGCAGTGC 
GGCACCTTGC AGGTCGATTT CGTGCTTCCC GAACGCCTGG GCGCCGATTA TGTCGGCGAG 
GATGGCGACA AGCATCGCCC GGTCATGCTC CACCGCGCCA TCCTTGGCAC CTTCGAGCGC 
TTCATGGGCA TCCTGATCGA GAACTGCGCC GGCCGTTTCC CCTTCTGGCT GGCGCCGGTG 
CAGGTCGTGG TCGCGACCAT CACCTCGGAT GCCGACGATT ACGCCCGCAC GGTGCTCGCC 
GCCCTCAAGG CCAAGGGCTT GCGCGCGGTC GCCGATCTGC GCAATGAAAA AATCAACTAC 
AAGGTGCGCG AGCATTCGCT GGCCAAGGTG CCGGTCATGC TGGTGGTCGG ACGCAAGGAG 
GCCGAAACCG GCGGCGTGGC CTTGCGTCGC CTGGGCGGTC AGAGCCAGGA AGTCCTTGCG 
CTTGATGAAG CCATTGCTAC ACTTGCCAAC GAGTCGGTTG CTCCCGATCT GCGCGCCGCC 
CCCCAGGGGT AA 

 

Protein sequence

MVAISLPDGS VRSYEGPVTG RQIAEDIGPG LAKAALAVTI DGTMKDLSVP ITTDASVSLI 
TARDAAALEL LRHDAAHVMA QAVQELYPGT QVTIGPAIEN GFYYDFARAE PFTPEDLERI 
EERMREIVGR DLPIVREVWE RDEAIAYFTK LGETYKAELI TGLPANEDVS VYRQGDWLDL 
CRGPHLPSTG KLGTAFKLMK LAGAYWRGDS RNPMLQRIYG TAWPDRKQLD AYLTMLAEAE 
KRDHRRVGQE MDLFHLQEEA QGAVFWHPKG WTVYRTLQNY MRRRLDLAGY VEVNTPMLVD 
RALWEKSGHW EKFRQNMFIS EAEDKLLAMK PMNCPCHIQI FKQGIKSYRD LPLRMAEFGA 
CHRNEASGAL HGLMRVRAFV QDDAHIFCTE DQIVSETQAF CDLLKSVYRD LGFTEIKVKF 
SDRPEVRAGS DETWDKAEAA LREATDAAGL EWTLNPGEGA FYGPKLEFVL RDAIGRDWQC 
GTLQVDFVLP ERLGADYVGE DGDKHRPVML HRAILGTFER FMGILIENCA GRFPFWLAPV 
QVVVATITSD ADDYARTVLA ALKAKGLRAV ADLRNEKINY KVREHSLAKV PVMLVVGRKE 
AETGGVALRR LGGQSQEVLA LDEAIATLAN ESVAPDLRAA PQG