Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A3479 |
Symbol | dapD |
ID | 3836932 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 4004094 |
End bp | 4004945 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637827600 |
Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
Protein accession | YP_428560 |
Protein GI | 83594808 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACGC CGAGCTTGCA GACCACCATC GAGGCCGCCT GGGAGAGCCG CGAGGGCGTG ACCCTGGAGA CGCGGGGAGC CGTGCGCGAC GCGGTCGAGG CCGTGCTCGA CGGCCTGGAC GCCGGGATCT ATCGCGTCGC CGAAAAGATC GGCGAGACCT GGGTTGTCCA TCAGTGGCTG AAGATGGCGG TGCTGCTGTC CTTCCGCCTC AACGACATGA CACCGGTTTC CGGCGCGCCG GGCGGCGCCA CCTGGTGGGA CAAGGTTCCC TCCAAATTCG CCGGCTGGGG GGAAGACCGC TTCCGCGCCG CCGGATTCCG CGCCGTTCCC GGCGCCATCG TCCGCCGCTC GGCCCATATC GCGCCGGGCG TCGTGCTGAT GCCCAGCTTC GTCAACCTCG GCGCCCGCGT CGAATCCGGG GCGATGATCG ACACCTGGGC GACCGTGGGG TCTTGCGCCC AGATCGGGCG CAACGTTCAT CTGTCGGGCG GGGCGGGGAT CGGCGGCGTG CTGGAACCCC TTCAGGCCGG TCCGGTGATC ATCGAAGACA ACTGCTTCAT CGGCGCCCGC TCCGAGGTCG CCGAGGGGGT GCTGGTGGAA ACCGGCGCCG TGCTGTCGAT GGGCGTGTTC ATCGGCGCCT CGACCCGCGT CATCGATCGT GAGACCGGCG AGGTCTTCAT GGGCCGGGTT CCGGCCTATT CGGTGGTGGT GCCGGGATCG CTGCCCGGTA AGCCGCTGCC CGATGGCACG CCGGGCCCCG GTCTGGCCTG CGCGGTGATC GTCAAGCGGG TCGACGAGCG CACCCGCTCC AAGGTCTCGA TCAACGATCT GCTGCGCGAT ACCCCGCGCT GA
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Protein sequence | MTTPSLQTTI EAAWESREGV TLETRGAVRD AVEAVLDGLD AGIYRVAEKI GETWVVHQWL KMAVLLSFRL NDMTPVSGAP GGATWWDKVP SKFAGWGEDR FRAAGFRAVP GAIVRRSAHI APGVVLMPSF VNLGARVESG AMIDTWATVG SCAQIGRNVH LSGGAGIGGV LEPLQAGPVI IEDNCFIGAR SEVAEGVLVE TGAVLSMGVF IGASTRVIDR ETGEVFMGRV PAYSVVVPGS LPGKPLPDGT PGPGLACAVI VKRVDERTRS KVSINDLLRD TPR
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