| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3374 |
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| Symbol | |
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| ID | 3836826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 3889520 |
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| End bp | 3890998 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637827495 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_428455 |
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| Protein GI | 83594703 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGCGAC TGGTACGGAG TCGCAACGGG ACGGTGGGAA GAGTGAGCGA GGGGGTCCGG
GGAGGACACA AACGGCTGCG CGGCGCGAAC CGTCCTTGGC CGGGGGTCAG GCGAACCAGG
GCTGCCGATG CCATGGGCGA GCTGATCGAT CGCCTGCTCA ATGGCGTGCT GATCGTCGAT
TCGACGCTGC GCCCGCTCTA TGCCAATCGT GAATTCCTGC GCCTGCTTGG CCTGCCCGAC
GCCGACACCT TGCTGCGGCC GGCGGGGCTG GAACGCTTCC TGCCCGAGGA CAACCGCCAA
GTCCTGCTCG ACATGACCCA TCGGCTGTTC TCCCATCAAA GCCAGCGCGC TTCGCAGCGC
CTTGAGGTGG TGCGCGCCGA CAACGCCACC CTGTGGCTTG ATTTCAGCGC CGCCCTTGGC
CGTTGGGCGG AGCGCGACGT GGTGCAGATC GCCGTTGTGG ACGCCACCGA GCGGGTAACC
CACGAAAGCG AGTTGGAGTT CAACCGGGCG CAATTGGAAA ATCAGGCCGT TGAGCTGGTG
GCCCTGGCCG AGGATCTGAA CGCCGAACGC GAACAGCTTG AAACAGCGCG CCTGGACGCC
GACGAGGGCC GGCGCTTCTT GCAGACGCTG ATCGCCACCA TTCCCAATCC GTTTTTCCAC
CAGGACCTCG AGGGCAGGAT TCGCGGCTGC AACGCCGCTT TCGCCGCCCT TCACGGCCGC
GACCATCGCA CCGACATGTT CGGCCTGACG GTTGCCGATC TAACCGACGC GGCCTTCTCC
AGCCGCACCG AACGGCTCGA CGCGGAGCTT ATGGCCAAGG GTGGGAACGT TTCCTATGAA
GCGGTCTTCG CCGATGCCGA GGGCCGGGCG CGGACGATGA TCTACAACAA GGCCGTGCTG
ACCGACGCCG CCGGCCAAGC CGTCGGGCTG GTGGCGGTCA TCACCGACAT CACCGAGCAA
AAGCGCATGG AAGAGGCGCT GCGCCGACTG GCCACCACCG ATCCCTTGAC CGGAGCGCTC
AATCGCCGGG CCTTCATGGA GGCGGCGCGG CGCGATCTCG CCCTCGCCCA GCGCCATGGC
GAACCGGTGA CCGTGGCCCT GGCCGACATC GACCACTTCA AGCGGGTCAA CGACCAGCAT
GGCCATGCCA CCGGCGACGA GGCGCTCAAA ACCTTTGTCG CCACCGTCCA CGGCGCGCTG
CGCGCCTCCG ATGTCCTGGG ACGGATGGGC GGCGAGGAAT TCGCCCTGAT CCTGCCCCAT
ACCGCCCTGG CTTCGGCGAT GCTTCTGGCC GACCGTCTGC GCCAGACCCT GGCCAACTTG
CGGGTTCCCT GCCCGTCGGG CGAGGTTGAA TTCACCGTCA GCATCGGCTT GGCCGAACTG
GGGACCCACG GCACCACCAT CGATACGCTG CTGCAGGCGG CCGACGAAGC CCTGTATCGG
GCCAAATCCG CCGGCCGCAA CCGGGTGATC GCCGCCTAG
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| Protein sequence | MRRLVRSRNG TVGRVSEGVR GGHKRLRGAN RPWPGVRRTR AADAMGELID RLLNGVLIVD
STLRPLYANR EFLRLLGLPD ADTLLRPAGL ERFLPEDNRQ VLLDMTHRLF SHQSQRASQR
LEVVRADNAT LWLDFSAALG RWAERDVVQI AVVDATERVT HESELEFNRA QLENQAVELV
ALAEDLNAER EQLETARLDA DEGRRFLQTL IATIPNPFFH QDLEGRIRGC NAAFAALHGR
DHRTDMFGLT VADLTDAAFS SRTERLDAEL MAKGGNVSYE AVFADAEGRA RTMIYNKAVL
TDAAGQAVGL VAVITDITEQ KRMEEALRRL ATTDPLTGAL NRRAFMEAAR RDLALAQRHG
EPVTVALADI DHFKRVNDQH GHATGDEALK TFVATVHGAL RASDVLGRMG GEEFALILPH
TALASAMLLA DRLRQTLANL RVPCPSGEVE FTVSIGLAEL GTHGTTIDTL LQAADEALYR
AKSAGRNRVI AA
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