Gene Rru_A3363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A3363 
Symbol 
ID3836815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp3875419 
End bp3876966 
Gene Length1548 bp 
Protein Length515 aa 
Translation table11 
GC content67% 
IMG OID637827484 
ProductPAS/PAC sensor Signal transduction histidine kinase 
Protein accessionYP_428444 
Protein GI83594692 
COG category[T] Signal transduction mechanisms 
COG ID[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGGCG AGCCCGTCGG TCTGGCCCTG CAACGTCTCT ACGACTTGAC CCGTCTGGTT 
TCCGACTGGA TCTGGGAGAC CGATTCCGCC GGCCTTCTGA CCTACGCTTC CGACCGGGTT
TTTGAAATCC TCGGATATCC GGCCCGGGCC CTGATCGGCC ACCCCTTCGC CGAACTTGCG
GCCTCGGGCG ACCCGCCGTT CTTCAAAAGC GATCCGCGGC CCTTCCGCGA GCAGCGCTTC
GAGGCCCGCC ACAGCGACGG CTCGCCGCGC GTTCTGCTGA TCAGCGCCGT TCCGCTGTTC
GATGCGCAAA GCGGCGACCG CCAGGGCTGG CGCGGCGCGG CCAAGGATAT CACCCAAAGC
GAGCGGGCCG ACGCCGAGAT GGACCGCCAG CGCCGTTTCC AGCAGACCCT GCTTGACGCC
ATCCCCCTGC CGGTTTTCCT GAAAGACCGC GAGGACCGCT ATCAGGGCTG CAATCTGGCT
TTCGAAACCG CCTCGGGCCG CAGCCGCGCC GAAATCCTCG GTCAGCGGAT GGAGCAGGTT
CTGCGCAGCG AGAATTACGA CCGCCACCGC GCCGAAGAGG CCCTTGTGCT GCGCGAGGGG
CGGACGCGGG TGTGGGAGGC GATGGAACAC GACGTCTCGG GGCGCCACAA GCTGATCTCG
ATCACCGCCT CGCCCTATCG CGAACCGGGC GATCCCACGG TGCGCGGCTT GATCGGCGTC
GTCTCCGATA TCACCCGGCG CCAGCGCGCC GAGGACGCTT TGCGGGCCTC GGTGGTCGAA
TTGACCGCCT CGAACCGCGA GCTGCAGCAT TTCGCCGAGA TCGCCGCCCA TGACCTTCAA
GAACCGGTGC GCGCCGTGGT CAGCCATTGT CAGCTTCTTG AACGCCATCT GGGCGACGCC
CTGGACGGGC CGGCCCGCGA CCATATGATC TTCGCCATCA CCGGCGCCCG GCGGATGCGC
GATCTTATCC AGGATCTGTT GATCTATGCC CGGGCCGGTC GCGATGGCCA GTTCCACGAG
GTCGTCGACA CCGCCGATCT GGCGCGCGAG GTCGTTTCCG CCCTGGCCGA CGAGATCGCC
GCCAGCGGCG CGACCATCCG CATCGACCCG CTTCCCAGCG TTCTCGGGCG GCGGCGCGAT
TTGTTCGACG TGATGGTCAA CCTGTTTGAC AACGCCTTGA AGTTCCGCCG CCCCGATGTC
GTTCCCGAGG TCACCCTGAA GGCCGCCGAA ACCCTGGATG CCTCGGGTCT GTGGTGCTTC
ACCCTGAGCG ATAATGGCAT CGGCCTCGAC CCCGTCCACG GTGCCCAGAT CTTCGCCCTG
TTCCGCCGGC TCCATGGCGC CGACCGCTAT CCGGGCACCG GGGTTGGGCT GGCGATCTGT
CGGCGAATCG TTGAACAGCA CGGCGGCACC ATCTTCGTCG AAAGCGCCCC CGGGGTCGGC
ACGCGCTTCC ATTTCACCCT TCCCGCCGCC CCCTCCGAGG AGCCGGATCG GCTGGTCGGC
CGAGGAACCC GCTCCGCGCC CCGACCTGTT ATCGACGGGG GCGGGTGA
 
Protein sequence
MSGEPVGLAL QRLYDLTRLV SDWIWETDSA GLLTYASDRV FEILGYPARA LIGHPFAELA 
ASGDPPFFKS DPRPFREQRF EARHSDGSPR VLLISAVPLF DAQSGDRQGW RGAAKDITQS
ERADAEMDRQ RRFQQTLLDA IPLPVFLKDR EDRYQGCNLA FETASGRSRA EILGQRMEQV
LRSENYDRHR AEEALVLREG RTRVWEAMEH DVSGRHKLIS ITASPYREPG DPTVRGLIGV
VSDITRRQRA EDALRASVVE LTASNRELQH FAEIAAHDLQ EPVRAVVSHC QLLERHLGDA
LDGPARDHMI FAITGARRMR DLIQDLLIYA RAGRDGQFHE VVDTADLARE VVSALADEIA
ASGATIRIDP LPSVLGRRRD LFDVMVNLFD NALKFRRPDV VPEVTLKAAE TLDASGLWCF
TLSDNGIGLD PVHGAQIFAL FRRLHGADRY PGTGVGLAIC RRIVEQHGGT IFVESAPGVG
TRFHFTLPAA PSEEPDRLVG RGTRSAPRPV IDGGG