Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A3363 |
Symbol | |
ID | 3836815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 3875419 |
End bp | 3876966 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637827484 |
Product | PAS/PAC sensor Signal transduction histidine kinase |
Protein accession | YP_428444 |
Protein GI | 83594692 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGGCG AGCCCGTCGG TCTGGCCCTG CAACGTCTCT ACGACTTGAC CCGTCTGGTT TCCGACTGGA TCTGGGAGAC CGATTCCGCC GGCCTTCTGA CCTACGCTTC CGACCGGGTT TTTGAAATCC TCGGATATCC GGCCCGGGCC CTGATCGGCC ACCCCTTCGC CGAACTTGCG GCCTCGGGCG ACCCGCCGTT CTTCAAAAGC GATCCGCGGC CCTTCCGCGA GCAGCGCTTC GAGGCCCGCC ACAGCGACGG CTCGCCGCGC GTTCTGCTGA TCAGCGCCGT TCCGCTGTTC GATGCGCAAA GCGGCGACCG CCAGGGCTGG CGCGGCGCGG CCAAGGATAT CACCCAAAGC GAGCGGGCCG ACGCCGAGAT GGACCGCCAG CGCCGTTTCC AGCAGACCCT GCTTGACGCC ATCCCCCTGC CGGTTTTCCT GAAAGACCGC GAGGACCGCT ATCAGGGCTG CAATCTGGCT TTCGAAACCG CCTCGGGCCG CAGCCGCGCC GAAATCCTCG GTCAGCGGAT GGAGCAGGTT CTGCGCAGCG AGAATTACGA CCGCCACCGC GCCGAAGAGG CCCTTGTGCT GCGCGAGGGG CGGACGCGGG TGTGGGAGGC GATGGAACAC GACGTCTCGG GGCGCCACAA GCTGATCTCG ATCACCGCCT CGCCCTATCG CGAACCGGGC GATCCCACGG TGCGCGGCTT GATCGGCGTC GTCTCCGATA TCACCCGGCG CCAGCGCGCC GAGGACGCTT TGCGGGCCTC GGTGGTCGAA TTGACCGCCT CGAACCGCGA GCTGCAGCAT TTCGCCGAGA TCGCCGCCCA TGACCTTCAA GAACCGGTGC GCGCCGTGGT CAGCCATTGT CAGCTTCTTG AACGCCATCT GGGCGACGCC CTGGACGGGC CGGCCCGCGA CCATATGATC TTCGCCATCA CCGGCGCCCG GCGGATGCGC GATCTTATCC AGGATCTGTT GATCTATGCC CGGGCCGGTC GCGATGGCCA GTTCCACGAG GTCGTCGACA CCGCCGATCT GGCGCGCGAG GTCGTTTCCG CCCTGGCCGA CGAGATCGCC GCCAGCGGCG CGACCATCCG CATCGACCCG CTTCCCAGCG TTCTCGGGCG GCGGCGCGAT TTGTTCGACG TGATGGTCAA CCTGTTTGAC AACGCCTTGA AGTTCCGCCG CCCCGATGTC GTTCCCGAGG TCACCCTGAA GGCCGCCGAA ACCCTGGATG CCTCGGGTCT GTGGTGCTTC ACCCTGAGCG ATAATGGCAT CGGCCTCGAC CCCGTCCACG GTGCCCAGAT CTTCGCCCTG TTCCGCCGGC TCCATGGCGC CGACCGCTAT CCGGGCACCG GGGTTGGGCT GGCGATCTGT CGGCGAATCG TTGAACAGCA CGGCGGCACC ATCTTCGTCG AAAGCGCCCC CGGGGTCGGC ACGCGCTTCC ATTTCACCCT TCCCGCCGCC CCCTCCGAGG AGCCGGATCG GCTGGTCGGC CGAGGAACCC GCTCCGCGCC CCGACCTGTT ATCGACGGGG GCGGGTGA
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Protein sequence | MSGEPVGLAL QRLYDLTRLV SDWIWETDSA GLLTYASDRV FEILGYPARA LIGHPFAELA ASGDPPFFKS DPRPFREQRF EARHSDGSPR VLLISAVPLF DAQSGDRQGW RGAAKDITQS ERADAEMDRQ RRFQQTLLDA IPLPVFLKDR EDRYQGCNLA FETASGRSRA EILGQRMEQV LRSENYDRHR AEEALVLREG RTRVWEAMEH DVSGRHKLIS ITASPYREPG DPTVRGLIGV VSDITRRQRA EDALRASVVE LTASNRELQH FAEIAAHDLQ EPVRAVVSHC QLLERHLGDA LDGPARDHMI FAITGARRMR DLIQDLLIYA RAGRDGQFHE VVDTADLARE VVSALADEIA ASGATIRIDP LPSVLGRRRD LFDVMVNLFD NALKFRRPDV VPEVTLKAAE TLDASGLWCF TLSDNGIGLD PVHGAQIFAL FRRLHGADRY PGTGVGLAIC RRIVEQHGGT IFVESAPGVG TRFHFTLPAA PSEEPDRLVG RGTRSAPRPV IDGGG
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