Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A3300 |
Symbol | |
ID | 3836747 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 3797539 |
End bp | 3799428 |
Gene Length | 1890 bp |
Protein Length | 629 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637827416 |
Product | ABC transporter component |
Protein accession | YP_428382 |
Protein GI | 83594630 |
COG category | [R] General function prediction only |
COG ID | [COG4178] ABC-type uncharacterized transport system, permease and ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGATAC CCGACCCCTC CCCGCGTCCT TCCCCGGAAC CCGTGAAAGC CGATACCGAC GCCCTCTGGC CGCAAGTGCG CAGCATGGCG CGGGCCTTCT GGAAAAGCCC GGCGCGCAAC CGCCTGATTT TTCTGGGCGG TGGTCTGGCC ACGGTGATCG CTCTCACCGC CTTTGGCCAG ATGTGGCTGA ACGCCTGGAA CCAGCCGTTT TATGATTCGC TGGCGCGCAA GGATATGGAT GGCTTCATCC ACCAGCTTTG GGTTTTCGCC GGCATCGCCT TTCTTCTTCT CACCCTCAAT GTCAGCCAGA CCTGGCTCAA CCAGTCGACC AAGGTGAAGC TGCGCGAGGG GCTGGTCCGC GACCTGCTTG ATGACTGGCT GCAAGGACGG CGGGCCTTCC GTCTGGCCTT CAACAGCGAA ATCGGCGTCA ACCCCGACCA GCGCATCCAC GAGGACGCCC GCCATCTTTC CGAACTGACC ACCGATCTTG GCATCGGCCT GTTACAGGCC TCCTTGCTGC TCGCCACCTT CATCGGCGTG CTGTGGGGGC TGTCGCGGGG CATCGTCTTG CATATCGACG GGCAGGTCCT GGCCATTCCC GGTTATATGG TGTGGTGCGC CCTGCTTTAC GCTGGCATCG CCTCGCTGCT CAGTTGGAAG GTCGGCAGCC CGCTGGTCCG GCTAAATGCA TTGCGCTATG CCCGCGAAGC CGATCTGCGC TTCAATTTGG TCCGGGTCAG CGAACATATG GAGGGCATCG CCCTCCACGG CGGCGAGGCC GATGAACGCG ACCGTCTGTC GAGCGATCTC GACCGCGTTC TGGGCATCAT GCGCCGCATC GTCGGCGCGG TGACCGGCCT GACCTGGATC ACCGCCGGCT ATGGCTGGTT CACCCTGGTG GCGCCGATCC TGGTCGCCGC GCCGGGCTAT TTCCACGGCA ATCTCAGCTT CGGCGAATTG ATGATGGCGG TCGGCGCCTT CATCCAGGTC CAGCAGGCCC TACGCTGGTT CATCGACAAC GTCAGCGCCA TCGCCGACTG GCGGGCGACC CTTTTGCGGG TATCGAGCTT CCGCGAGGGG CTTCAGGCGA TGGATCGCCT GGGCGAGGGG AGGGGTCGCA TCGATTTCGC GCCGTCCACC GACAGGCAGG TCATCCTCTC GGGTCTGGAA GTCGCCTCGC CAGCCGGAGC GATCTCGCTC AGCCAGCCCG AGGTGGTGAT CGAGCCCGGC CAACACCTGT TGATCATCGG CGATTCGGGC ACCGGCAAAA CCGTGTTCTT CCGGGCCATC GCCGGGCTGT GGCCCTGGGG CAAGGGCCGC ATCGGCCTGC CGCCGGACGA CGACTTGCAA GACCGCGAGG GCGATGGCGT GATGTTCCTG CCCCGCCACC CCTACATCCC GCCCGGCACC CTGCGCGCGG CGATCTCCTA TCCCCAGGCC GCCGATGATT TCGACGATTG GGCCCTGGTC GAAGCGCTGG GCAGCATGGG CTTGGCCCAT CTCGCCGCCC GCCTCAACCG CTCGGCGCGC TGGGACAAGG AACTGACCGA CGATGAGCGC CGCTGCCTCG CCTTCGCCCG GGTCGCCCTG CGCAAGCCCA AGGTGGTGAT CATGGACGAG GCCTTCGACG TGCTCGACGA CGCCTCGCTT GGCCGGGCGA TGGCGATTTT CCGCGAAAAG CTGCGCAAGA CCATCGTTAT CACCATCGGC CGCCCCGAGG TCCGCGATCA TTTCTTCGAT CAGGTCCTGC GGCTGTCGCT TGATCCCGCC GGCCCCCGTT TCCTTCCCGA CGACCACGCC ACCGGCGATG CCGATCGCGA CGCGCCGACG GCCGGAGACG ACGAGGAAGG CCTTTCCGTT CGTGCTGTTC CCAAGGAGAG CTCGCTATGA
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Protein sequence | MAIPDPSPRP SPEPVKADTD ALWPQVRSMA RAFWKSPARN RLIFLGGGLA TVIALTAFGQ MWLNAWNQPF YDSLARKDMD GFIHQLWVFA GIAFLLLTLN VSQTWLNQST KVKLREGLVR DLLDDWLQGR RAFRLAFNSE IGVNPDQRIH EDARHLSELT TDLGIGLLQA SLLLATFIGV LWGLSRGIVL HIDGQVLAIP GYMVWCALLY AGIASLLSWK VGSPLVRLNA LRYAREADLR FNLVRVSEHM EGIALHGGEA DERDRLSSDL DRVLGIMRRI VGAVTGLTWI TAGYGWFTLV APILVAAPGY FHGNLSFGEL MMAVGAFIQV QQALRWFIDN VSAIADWRAT LLRVSSFREG LQAMDRLGEG RGRIDFAPST DRQVILSGLE VASPAGAISL SQPEVVIEPG QHLLIIGDSG TGKTVFFRAI AGLWPWGKGR IGLPPDDDLQ DREGDGVMFL PRHPYIPPGT LRAAISYPQA ADDFDDWALV EALGSMGLAH LAARLNRSAR WDKELTDDER RCLAFARVAL RKPKVVIMDE AFDVLDDASL GRAMAIFREK LRKTIVITIG RPEVRDHFFD QVLRLSLDPA GPRFLPDDHA TGDADRDAPT AGDDEEGLSV RAVPKESSL
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