| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3296 |
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| Symbol | |
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| ID | 3836743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 3791931 |
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| End bp | 3793883 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637827412 |
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| Product | PAS/PAC sensor Signal transduction histidine kinase |
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| Protein accession | YP_428378 |
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| Protein GI | 83594626 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATACGT CTCCTTCCAT CGATCAGGAT TTCCGCACCC TGGTTGAAGT CGCGACCGAC
GCCATCATGG TCATCGGCGG TGACGGCACC ATCCTTTATG CCAATGACGC GGCCGGCGAG
TTGTTTGGTC ATCGCCCGGC CGACCTGCTG GGCCTGCCCT TCGGTCATCC GGCGATCCAT
GGTCAGATCT CCGAACTGGA CATCCATGGC CGCGACCGCC GCCGGGTCGC CGAAATGCGC
GTTTCCTCGG TGCATTGGGA AGGCGAGGCC AGCCACGTCA TCATCTTGCG CGACGTCAGC
GACCGGGTGC GCATGGCGGC GTCGCTGCGC GACAGATTGG CCTTCGAACA GCTTCTTCTT
GAAATCTCGG CGACCTTCGC CCGGGCCCGA TCCTCGGAGC GTCAGACGGC GAGCGCCCAG
GCCTTGGGAT TGTTTTGCGA CTATGTCCGG GCCGAACAGG CCTTTCTGCT GGCGCGGACC
GAGACGGGAG CCTTCGAGAT CATCGCCTTT TATCCGGCCG GTGAGCGCGG CAATGATCGG
GCCCTATCGC CGGCCCTGGG CGAGGAGGTG GAAGCCTGCC TGCGCGACAA CAGGGTGCAG
GCCCTTGTCG GCACCACCCT GGCCGCCAGC GGCGACGGGC GGACAGACGA CTCCGCCCGC
TGGATCGGCA TCCTGCCCCT GACCGATGGC GAGGAGGGCT TCGGCGCCTT GTGTCTGATG
CGCGCCACCC CGCCCGGCTT TGGCGCGGCG GCCTATGACC TCGAGTCCCT GCGTCCGGCC
CCGACGCTTT TTCTCGACGC CCTGCGCCGT ATGCGGCTGG AAGACCTGCT CACCCGCGCC
ATGGTCAAAC AGGCCTCGGT CTTCCGCCAG CTGGTCGAAG GCCTCTGTCT GGTCCGTGGC
CGCCGCGTCG TCCAGGCCAA TCAAGCCCTG GCCGACATGA TGGGCTATCA GGTCGACGAC
ATGCCCGGGC TGGAGACCAA AGCCTTCTTC GCCACCGAGG AAAGCTATGA GGCGGTCGGG
GAGAAAGGGT ACCAGGATGT GCGCGAAGGC CGCCTTTACA GCGCCGAGCA CCTGTTCAAG
CGACGGACTG GCGAACGCTT CTGGGGCGAG TTGAAAGGCG CCCCGGTCGA GGGCGAGGAT
AACGCCGATG GGGAAAGCGT CTGGGTTTTG CGCGATATCA CCGATCTGCG CGAGGCGGCC
GCTCGCAAAC AGCAACTGAT CGACGAATTA AGCCGCTCGA ACGCCGAGCT GGAGCGCTTT
GCCTTCATCG CCTCCCATGA TCTGAAGGAG CCGGTGCGCA TGGTGGCGTC CTATGTCAAC
CTGCTGTCGA AGCGCTATGG CAACAGCTTC GATGGCGAAG GGCGTGAGTT TTTGAACTTC
GCCCTGGAGG GGGCGCGGCG CATCCACCAG ATGATCGAGG GCATCCTTGA TTACGCCCGC
ATCGAGGCGT CCTCCCCCGA TCTTGACGCC GTCGCCCTTG AGGGCCCGCT TGATCGCGCC
CTGGCAAGCC TCGCCGATAC CTTGCGCGAC TCCGAGGCGC GGATCACCGT CCAGCGCCCT
TTGCCCACCG TTCTCGCCGT TCCGTCCGAA ATGGAACGGG TCTTCGTCAA TCTGATCGGC
AATGCCGTCA AATTCGCCAA ACCCGATCAA TCCCCGCACA TCGACATCAT GGTCGAGACC
TGCCCAAGCC CGCCGAAAGG GAAGGATCAG GGATCTCCGC TTTGCCATAT CACCATCCGC
GATGCCGGGA TCGGCATTCC CGAGGCGGCG CGCGAAAAGG TCTTTGATAT TTTCTGGCGG
CTGCATGGCC GGGAGAAATA CGACGGCACC GGCCTGGGCC TGGCCATCGT CAAGCGCATC
ATCGATCGCC GGGGCGGCCG GATCTGGATC GAATCCCGCG AAGGAACGGG AACCACCATC
CATATCCTCC AGCCCCTGGC GCCGAGCCCA TAA
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| Protein sequence | MDTSPSIDQD FRTLVEVATD AIMVIGGDGT ILYANDAAGE LFGHRPADLL GLPFGHPAIH
GQISELDIHG RDRRRVAEMR VSSVHWEGEA SHVIILRDVS DRVRMAASLR DRLAFEQLLL
EISATFARAR SSERQTASAQ ALGLFCDYVR AEQAFLLART ETGAFEIIAF YPAGERGNDR
ALSPALGEEV EACLRDNRVQ ALVGTTLAAS GDGRTDDSAR WIGILPLTDG EEGFGALCLM
RATPPGFGAA AYDLESLRPA PTLFLDALRR MRLEDLLTRA MVKQASVFRQ LVEGLCLVRG
RRVVQANQAL ADMMGYQVDD MPGLETKAFF ATEESYEAVG EKGYQDVREG RLYSAEHLFK
RRTGERFWGE LKGAPVEGED NADGESVWVL RDITDLREAA ARKQQLIDEL SRSNAELERF
AFIASHDLKE PVRMVASYVN LLSKRYGNSF DGEGREFLNF ALEGARRIHQ MIEGILDYAR
IEASSPDLDA VALEGPLDRA LASLADTLRD SEARITVQRP LPTVLAVPSE MERVFVNLIG
NAVKFAKPDQ SPHIDIMVET CPSPPKGKDQ GSPLCHITIR DAGIGIPEAA REKVFDIFWR
LHGREKYDGT GLGLAIVKRI IDRRGGRIWI ESREGTGTTI HILQPLAPSP
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