Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A3235 |
Symbol | |
ID | 3836682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 3730807 |
End bp | 3731982 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637827351 |
Product | secretion protein HlyD |
Protein accession | YP_428317 |
Protein GI | 83594565 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.185962 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCCAC CCCCCGCTTC CCGGCCGCGC CGGCCTTCCC GCCGTACCCT TGTTCTGATC CTTGGCCTTC TCGCCGCCTG CGCTCTCGGC GCCTGGGCAC TCGGCTGGTT CGGCGCCAAT GGCGACAAGG CGCCACCGCC GCGCCAGCAG ACCGTCGAGT TGGGCAGCGT CGAAAACGCC ATCACCGCCG TCGGCTCGCT CCAGCCCAAA ACCTATGTCG ATGTCGGCGC CCAGGTCTCG GGCAAGGTCT CCCATCTGCC CGTCGTCATC GGCGACCGGG TGGAAAAGGG CGATCTGCTG ACCGTCATCG ATCCCCGCAC CTATGAAGCC CGGGTGCGCA CCGACAAGGC GGCTTTGGCC AAGCTGCACG CCGACCGCCG AAAGGCCGAG GCCCAGCTTG GGCTGTCGCG CCAGCAACGC GCCCGCACCG AACGGCTGTT CCAGGCCAAG GCGACCAGCC AGGATTCCCT GGATTCGGCC CGGACCACCG TTCTTGTCGA TCAGGCGGCG ATCGAATCGA TCGATGCCCA GATCGAACAG GCCCTGGCCG AGCTTGACGC CGATCAGGCC GATCTTGATT ACACCCAGGT CTATGCGACG ATGAGCGGCA CCATTGTGTC GATCGCCGTG GTCGAGGGGC AAACCCTGAA CTCGGTGCAA TCGGCCCCCG ATCTGATGCG CATCGCCGAT CTCGACACCA TGACCGTCAA GGCCGAGGTC GCCGAGGCCG ATATCACCGC GATCAAACCC GGCATGCCGG GCTATTTCAC CACCCTGGGC GGCGGCGGAC GGCGCTGGCA GGGCACCGTG CGGCTGATCG AGCCGACCCC GGTCACCGAC AACGACGTGG TGCTTTATAA CGTGCTGATG GATGTGGCCA ATCCCGATGG CGCGCTGATG ACCGACATGA CCGCCCAGGT CTTTTTCCTC AAGGACCGGG CCGAGAACGT GCCGGTGGTG CCGCTGGCAG CCTTGACGCC GACGGCGACG GCCGGCACCT GGACGGCCAG CGTGCAGGGC CCGGGCGGCC TGGAACAGCG CACCGTGACC ACCGGCGTCG TCAATCGCGC CCTGGCCCAG GTGGTCGACG GGCTGGCGGT TGGCGACAAG GTGGTGCTGC CGCGCGCCAC CCCGGGCGCC ACCGCCGGCG GCTTCAAGCC GCCGCCGATG CTTTAG
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Protein sequence | MPPPPASRPR RPSRRTLVLI LGLLAACALG AWALGWFGAN GDKAPPPRQQ TVELGSVENA ITAVGSLQPK TYVDVGAQVS GKVSHLPVVI GDRVEKGDLL TVIDPRTYEA RVRTDKAALA KLHADRRKAE AQLGLSRQQR ARTERLFQAK ATSQDSLDSA RTTVLVDQAA IESIDAQIEQ ALAELDADQA DLDYTQVYAT MSGTIVSIAV VEGQTLNSVQ SAPDLMRIAD LDTMTVKAEV AEADITAIKP GMPGYFTTLG GGGRRWQGTV RLIEPTPVTD NDVVLYNVLM DVANPDGALM TDMTAQVFFL KDRAENVPVV PLAALTPTAT AGTWTASVQG PGGLEQRTVT TGVVNRALAQ VVDGLAVGDK VVLPRATPGA TAGGFKPPPM L
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