Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A3172 |
Symbol | |
ID | 3836618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 3664184 |
End bp | 3664819 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637827287 |
Product | lysine exporter protein LysE/YggA |
Protein accession | YP_428254 |
Protein GI | 83594502 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCGTTT CGCCCGACAC CCTGTGGCTG TTCGTGCCGG CGGCTCTGGC GCTTAATCTG ACGCCGGGCA ATGACATGCT GTTTTGCCTG GGCCAGGGCA TGCGCGGCGG GCCGGCCGCC GGGATGGCCG CCAGCCTGGG GGTGGCGACG GGCGGGGTTG TTCATACGCT GCTCGCCGCC TTTGGCTTGG CCGCCCTGGT CGCCGCCCAT CCCGGGCTGT TCGCGGTGAT CCGCTGGGTT GGCGTGGGCT ATCTGCTGTG GTTGGGCCTG CAAACCCTGC GCCGGCCGAT GGCGCCCCCG GCTTTTGGGC AAGCGCCAGG GGGCTCCGCC GGGGTTCTCC GGGCGTGGCG CGAGGGGATC GTCGTCAATC TGCTCAATCC CAAGGTGGTG GTTTTCGTGC TGGCCTTTCT GCCCCAGTTC GTCAAACCCG AAGCCGGGCC GGCGGTGCCG CAGATGCTGG TGCTGGGCGG CATTCTGAGC CTGGGTGGTA CGGTGGTGAA CGGCGTGGTC GGCGCCCTGG CCGGCGGCAT CGGTCGCACC CTGGCGACCA GCGGCCGGGC GCGAGAGGTC TTTCGCTGGG TGAGCGGGCT GGTTTTCGTC GGGCTTGCCG CCCGTCTGGC TTTCGAACGG CGCTAA
|
Protein sequence | MIVSPDTLWL FVPAALALNL TPGNDMLFCL GQGMRGGPAA GMAASLGVAT GGVVHTLLAA FGLAALVAAH PGLFAVIRWV GVGYLLWLGL QTLRRPMAPP AFGQAPGGSA GVLRAWREGI VVNLLNPKVV VFVLAFLPQF VKPEAGPAVP QMLVLGGILS LGGTVVNGVV GALAGGIGRT LATSGRAREV FRWVSGLVFV GLAARLAFER R
|
| |