Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A3159 |
Symbol | |
ID | 3836605 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 3650114 |
End bp | 3651400 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637827274 |
Product | general substrate transporter |
Protein accession | YP_428241 |
Protein GI | 83594489 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.761686 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAGTC TGGTCGGCAC CACCATCGAG TTCTATGACT TCTACGTTTA CGCCACGGCG GCGGTGCTGG TGTTTCCCCA TCTCTTCTTT CCGGCGGGCA ACGAAAAGAC GGCGCTGCTG GCCTCTTTCG CGGTGTTCGG CGCGGCGATG GGCGCTCGGC CGCTTGGCGC GGTGTTTTTT GGCCATCTTG GCGACAAGCG CGGCCGCAAG ATCACCCTGG TCGGCGCCTT GTTGACCATG GGCATCGCCA CTTTCCTGAT CGGCGTGCTG CCGACCTATG CCTCGGTTGG CTGGATCGCC CCGGCCATGC TGGTGGTGCT GCGTCTGGCC CAGGGCTTCG CCTTGGGCGG CGAGTGGAGC GGCGCCGCCC TGGTGGCGAC GGAGAACGCC CCGGCTGGCA AGCGGGCGAT CTTTGGCACC TTCCCCCAGC TTGGCGCGCC GATCGGCTTC ATCATCGCCA ACGGCCTGTT CCTGATCATC GCCGTGCTGC TGCCCTCAAG CGATCCGTCC AAGCCGTCGG AGGCCTTCCT TGATTGGGGC TGGCGCATCC CCTTCCTGTT CTCGGCGGTG ATGGTTATCT TCGGTTTGTG GGTGCGCCTG CATCTGGTTG AAAGCACCGC GTTTGAGAAG ACCGTGAAAA AGGGCGCGGT TCACAGCGTG CCGCTGGTGG CGGTGTTTCG AACCCATGGC AAGGAACTGG TGCTCGGCAC CTTCTACATG CTGGCGACCT ATGTTCTGTT CTATTTGATG ACGACGTTTT CTCTCAGCTA TGGCCGCGCC TCGGCCACGG CGGCCCTGCC CGGGCTGGGC TATGATTACC GGACCTTCGT TCTGATGATG ATCGCCGGCG TGGTGTTCTT CGGCCTCTTC ACCCTGCTGT CGGGCCCCTG GGCCGAGCGC TGGGGGCGGC GCAAGACGCT GATCGGCATC ACCCTTGGCA TCGTCGTGTT CGGCTTCCTG TGGGTGCCGA TGCTGGGCGC CGGCTTCGTC GGGGTGATGG CTTGGCTGAT CCTTGGCTTC ACGCTGATGG GCATGACCTT CGGCCCGATG GGCGCTTTGC TGCCCGAATT GTTCCCGGCC AATATCCGCT ATACCGGATC GGGCATCTCT TACAATGTCT CGTCGATCCT CGGCGCGGCC TTGGCCCCCT TCGTCGCCGT CGCCCTGTGG AGCGCCGGCG ATGGCAGCCC GTTCTGGGTG GGCATCTATC TGTCGGGCAT GGCCAGCCTG ACCTTGCTCG CCCTGGTGTT GGGCAAGGAA ACCAAGGATA TCGATATCGA GGCTTAG
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Protein sequence | MASLVGTTIE FYDFYVYATA AVLVFPHLFF PAGNEKTALL ASFAVFGAAM GARPLGAVFF GHLGDKRGRK ITLVGALLTM GIATFLIGVL PTYASVGWIA PAMLVVLRLA QGFALGGEWS GAALVATENA PAGKRAIFGT FPQLGAPIGF IIANGLFLII AVLLPSSDPS KPSEAFLDWG WRIPFLFSAV MVIFGLWVRL HLVESTAFEK TVKKGAVHSV PLVAVFRTHG KELVLGTFYM LATYVLFYLM TTFSLSYGRA SATAALPGLG YDYRTFVLMM IAGVVFFGLF TLLSGPWAER WGRRKTLIGI TLGIVVFGFL WVPMLGAGFV GVMAWLILGF TLMGMTFGPM GALLPELFPA NIRYTGSGIS YNVSSILGAA LAPFVAVALW SAGDGSPFWV GIYLSGMASL TLLALVLGKE TKDIDIEA
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