| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3094 |
|---|
| Symbol | |
|---|
| ID | 3836540 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 3559919 |
|---|
| End bp | 3561253 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637827209 |
|---|
| Product | O-antigen polymerase |
|---|
| Protein accession | YP_428176 |
|---|
| Protein GI | 83594424 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
|---|
| TIGRFAM ID | [TIGR03097] probable O-glycosylation ligase, exosortase system type 1-associated |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGATC TGCTGCTCGC GCTATTGCTG GTTTCCAGCC TGCCGTTGAT CATCGTCCGG
CCCTATGTGG GCGTGTTCGT CTGGTGCGTC GTGTCGCTGA TGAACCCGCA TCAGATGGCC
TATGGCTTCA TTTCATCGGC GCCGGTCGCC TTGCTGGTCG CCGGATCGAC GCTGATCGGG
CTGCTCGCCT CGCGCGAGCC CAAGCGCCTG CCCGGCGATC CCATCGTCAT CTGTATCCTG
CTTTTGGCCT TCTGGGTGTC GGTGACCACG GTCTTCGCCC TGCGCCCGGA CGTGGCCTTT
CCGTTGTGGG ACCGCACGAT CAAGATGTTC CTGATGGTGC TGGTCGGTCT GGCGCTGATC
CGCAGCCGGC AGCGCCTGCA CGCCCTGGTG TGGATCCTGG TCGTCAGCAT CGGCTTTTAT
GGGGTGCGTG GCGGCTTGTT CACCCTGGTC ACCGGCGGTG GCGGGCGGGT GGTCGGTCCG
CCAACGACGA TGATCGGCGA CAACAACTCC CTGGCCGCCG CCCTGATCAT GACCCTGCCC
CTGATGCGCT ATCTGCATCT GCAATCGGCC AACCGCTGGA TCCGCCTTGG CTTGGCCGGG
GCGATGGGGC TGACGGCGCT GTCGGTCCTT GGTTCGTTTT CGCGCGGCGC CCTGCTGGCG
TCGGTGGCGA TGTTTTTCTG GATGCTGGTG CGCTCGCGCA AGCGGCTGAT GATCCTGGCT
TTGGGGGCGA CCTTCGCCAT TGGCGGGCTG TTCCTGATGC CCGAGAGCTG GCACGACCGG
ATGAACACCA TCAGTGATTA TCAGGAGGAC GAATCGGCCA TGGGCCGCCT CGACGCCTGG
ACCTTCGCCT TCAATCTGGC GGTGGAGCGG CCCTTGGTCG GTGGCGGGTT CCGCATCAAT
GTCGACCGGG ATGTGTTTTT GCGGTTTTCC CCCGAGGCCG GGATCAACCG GGCTTTCCAC
AGCATTTATT TCCAGGTTCT GGGCGAGCAT GGCTTCGTTG GCCTGGGGTT GTTTCTGGCG
ACCCTGGCGC TGGGGTTTTT CAAGGCCGGC GCGCTGTCGC GTCAATGCGC CGGTGATCCG
AAACTGGCCT GGGCCCGCGA TCTTGGCGCG ATGTCCCAGG TCAGTCTGGT TGGCTATGCC
GCCGGCGGTG CCTTTCTCGA TCTGGCCTTC TTCGATCTTT TCTATTTCGT CGCCCTGTTG
CCGGTGATGG CCAGTTGGGT TCTGGCCAAC CCGCCGCCGG TCGTCTGGAA ACCGAAACCG
GTGAAAAGCC AAGTCCCGGG GCGCGGCCGG CCGCGCCGCG CCGCCTTGCC GCCGCCGAGG
GATGCCCTGC CATGA
|
|---|
| Protein sequence | MRDLLLALLL VSSLPLIIVR PYVGVFVWCV VSLMNPHQMA YGFISSAPVA LLVAGSTLIG
LLASREPKRL PGDPIVICIL LLAFWVSVTT VFALRPDVAF PLWDRTIKMF LMVLVGLALI
RSRQRLHALV WILVVSIGFY GVRGGLFTLV TGGGGRVVGP PTTMIGDNNS LAAALIMTLP
LMRYLHLQSA NRWIRLGLAG AMGLTALSVL GSFSRGALLA SVAMFFWMLV RSRKRLMILA
LGATFAIGGL FLMPESWHDR MNTISDYQED ESAMGRLDAW TFAFNLAVER PLVGGGFRIN
VDRDVFLRFS PEAGINRAFH SIYFQVLGEH GFVGLGLFLA TLALGFFKAG ALSRQCAGDP
KLAWARDLGA MSQVSLVGYA AGGAFLDLAF FDLFYFVALL PVMASWVLAN PPPVVWKPKP
VKSQVPGRGR PRRAALPPPR DALP
|
|---|
| |