| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2788 |
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| Symbol | |
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| ID | 3836228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 3222171 |
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| End bp | 3223493 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637826899 |
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| Product | cytosine deaminase |
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| Protein accession | YP_427872 |
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| Protein GI | 83594120 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.22354 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACTT TTCCCCCCGC CCAGGACTTG ATCGTCCGCA ACGCCAGCCT GCCCGATGGC
CGCCGCGCTC AGGACATCCT GATCCTGGCG GGCACGATCA AAGCCATCGG CCCGGCCCTG
GACGCGCCCG AGGCCACCCC GGTTCTTGAC GCCAAAGGCG ATCTGGTCGC CCCGCCCTTC
GTCGATGCCC ATTTCCATAT GGACTCGGCA CTGTCTTACG GCCTGCCGCG GATCAACGCC
TCGGGCACCT TGCTCGAAGG CATCGCCCTG TGGGGGGAAC TCAAGCCCGA GTTGACCCAT
CAGGCGATTG TTGATCGGGC GCTTGCCTAT TGCGACTGGG CGATCGGTCG CGGCCTGCTG
GCCATCCGCA GCCATGTCGA TATCTGCGAT CCCCGCCTGC TCGCCGTCGA CGCCCTGCTC
GAAGTCCGCG AAAAAGTCGC CCCCTGGCTG ACCTTGCAGC TTGTCGCCTT CCCCCAGGAT
GGCTTCTTGC GCGCCCAAGG CAGCCGCGAG CGCCTGATCG CCGCCCTGGA TCGCGGCGTC
GATGTGGTCG GCGGCATCCC GCATTTCGAA CGCACGATGG CTCAAGGCGC CGAAAGCGTG
CGCGCGCTGT GCGAGATCGC CGCCGAGCGC GGCTTGCGCG TGGATATGCA TTGCGATGAA
AGCGACGACC CGATGAGCCG CCACGTCGAG ACCCTGGCGG CGGAAACCAC CCGCCTCGGT
CTGGAAGGAC GGGTCACCGG CTCGCACCTG ACCTCGATGC ATTCGATGGA CAGCTACTAC
GTCTCGAAAC TGATCGCCCT GATGGCCGAG GCCGAGCTGG GGGTGATCGC CAATCCGCTG
ATCAACATCA CCCTTCAGGG CCGCCACGAC GGCTATCCCA AGCGCCGGGG GATGACCCGG
GTGCCCGAAT TGCTCGCCGC CGGTCTGACC GTGGCCTTCG GCCATGACTG CGTGATGGAC
CCCTGGTATG GCCTGGGCAG CGCCGACATG CTTGAAGTCG CCGCCATGGG CCTTCACGTC
GCCCAGATGA CCGGCCAGTC GGCGATGGCC GAGTGCTTCG CCGCCGTCAC CACGGCGCCG
GCCAAGCTGA TGGGGCTCGA CGATTACGGC CTGATGCCCG GCTGTCGGGG CGATCTGGTG
CTGCTGCAGG CCGGCGATCC GGTGGAGGCC CTGCGTCTGC GCGCGACCCG GCTGGCCGTG
GTGCGCGGCG GCCGGATCAT CGCCCGCACC CCGGCGGCCA CCGCCACCTT GGATCTGGGC
GACGGCGACC GCCCCACCCT AAACCCGGTG TCCTGGCGTG GCGGCGAGCG CCCGGGGTTC
TAA
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| Protein sequence | MTTFPPAQDL IVRNASLPDG RRAQDILILA GTIKAIGPAL DAPEATPVLD AKGDLVAPPF
VDAHFHMDSA LSYGLPRINA SGTLLEGIAL WGELKPELTH QAIVDRALAY CDWAIGRGLL
AIRSHVDICD PRLLAVDALL EVREKVAPWL TLQLVAFPQD GFLRAQGSRE RLIAALDRGV
DVVGGIPHFE RTMAQGAESV RALCEIAAER GLRVDMHCDE SDDPMSRHVE TLAAETTRLG
LEGRVTGSHL TSMHSMDSYY VSKLIALMAE AELGVIANPL INITLQGRHD GYPKRRGMTR
VPELLAAGLT VAFGHDCVMD PWYGLGSADM LEVAAMGLHV AQMTGQSAMA ECFAAVTTAP
AKLMGLDDYG LMPGCRGDLV LLQAGDPVEA LRLRATRLAV VRGGRIIART PAATATLDLG
DGDRPTLNPV SWRGGERPGF
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