Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A2748 |
Symbol | |
ID | 3836187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 3180985 |
End bp | 3181680 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637826858 |
Product | ABC transporter component |
Protein accession | YP_427832 |
Protein GI | 83594080 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00767275 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCTTC CTTTGGTCGA GGCGCGCAGC CTGTCCAAAA GCTTCGGCGA GGGCGAACTG GCCAGTCAGG TTCTCAAAAG GCTGAGTTTT GATATCAATG CGGGTGAGCG CGTCGCCCTG GTCGGTCCCT CGGGCTCGGG AAAATCCACC CTTCTGGCCG TGCTTGGCAC CTTGCTGGGG GCGACCTCGG GCGACTTGCG CATCCTTGGC CAGCCGATGA TCGGCCTGCC CGAAGCCGAG CTGGCGCGCT TTCGCAACCG TAATCTTGGC TTCGTCTTCC AGTTCCATCA CCTGCTGCCC GATTTCACCG CCCTGGAAAA CGTCCTGTTC CCCGCCGCCG CCGGCAAGGG CCGCGAGACC CGCCTCATGC GCGAGCGGGC CCGCGCCCTG TTGGTGCGCG TGGGCCTGGA AGACCGCGTC GATTACGGGG CGCGCAAATT ATCGGGTGGC CAGAAGCAGC GCGTCGCCCT GGCCCGCGCC CTGATCAACC GCCCGGCCCT GGTCCTGGCC GACGAACCCA CGGGCAATCT CGACAGCGGT CCGGCCGAAC AGGTGATGAA CCTGCTGGGC GAGATCAACG CCGAAGACGG CACCACCTTC CTGATCTCCA CCCACGACGC CGCCGTCGCC GCCCGCTGCA CCCGCCGCAT GGAACTGCTC GACGGCCGTC TGGTCGGCCA GGATCCGGCG GATTAG
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Protein sequence | MTLPLVEARS LSKSFGEGEL ASQVLKRLSF DINAGERVAL VGPSGSGKST LLAVLGTLLG ATSGDLRILG QPMIGLPEAE LARFRNRNLG FVFQFHHLLP DFTALENVLF PAAAGKGRET RLMRERARAL LVRVGLEDRV DYGARKLSGG QKQRVALARA LINRPALVLA DEPTGNLDSG PAEQVMNLLG EINAEDGTTF LISTHDAAVA ARCTRRMELL DGRLVGQDPA D
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