| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2695 |
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| Symbol | rpoB |
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| ID | 3836130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 3117310 |
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| End bp | 3121491 |
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| Gene Length | 4182 bp |
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| Protein Length | 1393 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637826801 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_427779 |
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| Protein GI | 83594027 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAAGT CGTTGACCAG TCGGAAGCGC ATTCGTAAGG ACTTCGGCCG GATTCCGACC
GTGGCCCCCA TGCCGAACCT GATCGAGGTG CAGAAAAGCT CCTATGATCA GTTCCTGCAA
ATCGGCGTTC CGGTGGATAA ACGCACCGAC AGCGGCCTCC AGGAGGTCTT CAAGTCGGTT
TTCCCGATCC GCGACTTTTC GGGCAAGGGC GAACTCGAGT TCGTGGCCTA CGAGCTTGAA
GAGCCGAAAT ACGACACCGA TGAATGCCAG CAGCGGGGCA TGACCTTCGC CGCGCCGCTC
AAGGTGACCT TGCGCCTGCT GGTCTGGGAC GTCGACGAGG AAACCGGCGC CCGCTCGATC
CGCGACATCA AGGAGCAGGA CGTCTATATG GGCGATATGC CCCTGATGAC GTCGAACGGC
ACCTTCATCA TCAACGGCAC CGAGCGCGTC ATCGTCTCCC AGATGCACCG CTCGCCGGGC
GTCTTCTTCG ACCACGACAA GGGCAAGACC CATTCGTCGG GCAAATTCCT GTTCGCCGCC
CGGGTCATTC CCTATCGCGG GTCGTGGCTG GATTTCGAGT TCGACGCCAA GGACATGGTC
TATGTGCGCA TCGACCGTCG CCGCAAGTTG CCGGTGACGA CGCTGCTCTA TGCCCTGGAA
GGCGCCGCCG CCACCGCCTT GCGCGAGGCG CGCACCGCCG AGGGCCGTTC GGTCGATCCG
TCCGAGATCG CCGGCATGAC CTCGGAGGAA ATCCTTGATT TCTTCTATCA GAAGCTCAGC
TACAAGCGCG ACGACAAGGG CTGGAAGGTC GACTTCAAGC CCGATCATCT GCGCGGCGTG
AAGCTGATGT TCGATCTGGT CGACGCCGCC ACCGGCGAGG TCAAGATCGA GGCCGGCACC
AAGGTCACCC CCCGGGCGGC GCGCAAGCTC GCCGAGGACG GCATGACCGA GATGCGCGTC
TTCACCGAGG AGCTGGTCGG CCGCTACGCC GCCGAGGACA TGATCAACGA GGCCAGCGGC
GAGATCTATG CCGAGGCCGG CGAGGAACTG ACCGAGGCGA TGCTGGCCGA CATGGAGAAG
GCCGGCTTCA CCGAGCTGCG CGTGCTTCAT ATCGACCATG TCAACGTCGG TCCCTATGTG
CGCAACACCC TGGCGATGGA CAAGAACACC ACCCGCGAGG AAGCGCTGAT CGATATCTAC
CGGGTGATGC GCCCGGGCGA GCCGCCGACG CTCGAGACCG CCGACGCCCT GTTCAAGGGC
CTGTTCTTCG ATTCCGAGCG CTATGACCTG TCGGCCGTCG GCCGGGTGAA GATGAACGCC
CGCCTGGGCT TCACCATGCA GGAAGCCCCC GACACCATGC GGGTGCTGCG CAAGGAAGAC
GTGCTGCACA TCATCCGCCA GCTTGTCGAG CTCAAGGACG GCAAGGGCGA GATCGACGAC
ATCGATCACC TGGGCAACCG TCGTGTGCGC TCGGTCGGCG AACTGATGGA AAACCAGTAC
CGCGTCGGCC TGCTGCGCAT GGAGCGCGCC ATCCGCGAGC GCATGAGCAG TGTGGACATC
GATACCGTGA TGCCCCACGA CCTGATCAAC GCCAAGCCGG CCGCCGCCGC GGTGCGCGAG
TTCTTCGGAT CCTCGCAGCT CTCGCAGTTC ATGGACCAGA CCAACCCGCT GTCGGAAATC
ACCCACAAGC GCCGCCTGTC GGCGCTTGGC CCCGGTGGTC TGACCCGCGA GCGCGCCGGC
TTCGAAGTGC GCGACGTCCA TCCCACCCAT TACGGCCGCA TCTGCCCGAT CGAAACCCCC
GAAGGGCCGA ACATCGGTCT GATCAACAGC CTGGCGACCT TCGCCCGGGT CAATCAGTAC
GGTTTCATCG AAAGCCCCTA CCGCAAGGTG GTCGAGGGCA CGGTGACCGA CGAGGTGACC
TATATGTCGG CGATGGAAGA GGGCAAATAC GTTATTGCCC AGGCCAACGC CGCCCTGACC
GAAGACGGCC ATTTCGCCGA TGACCTGATC TCGTGCCGCA AGGCCAGCGA CTTCGAGATG
GTGCAGCCCC AGGACATCGA CTACATCGAC GTGTCGCCCA AGCAGTTGGT CTCGGTCGCC
GCGGCGCTGA TCCCCTTCCT CGAGAACGAC GACGCCAACC GCGCCCTGAT GGGCTCGAAC
ATGCAGCGTC AGGCCGTTCC CCTGGTCAAG GCCGAGGCGC CTTACGTCGG CACCGGCATG
GAGGCCGCCG TCGCCCGCGA TTCGGGGGCG ACCATCGCCG CCAAGCGCGC CGGCGTCGTG
CAGCAGGTTG ACGCCACCCG TATTGTTATC CGGGCGACCG AAGACCTGAA GATCGCCGAA
TCGGGCGTTG ATATCTATCG TCTGCAGAAG TTCCAGCGCT CCAACCAGAG CACCTGCATC
AACCAGCGTC CGCTGGTGAA GGTGGGCGAT CTGGTCGGTC GCGGCGAGAT CCTGGCCGAC
GGTCCGTTGA CCGAGATGGG CGAGCTGGCC CTTGGCCGGA ACGTCCTCGT CGCCTTCATG
CCGTGGAATG GTTACAACTT CGAAGACTCG ATCCTGATCT CCGAGCGCAT CGTCAGCGAC
GACGTGTTCA CCTCGATCCA TATCGAGGAG TTCGAGGTGA TGGCCCGCGA CACCAAGCTG
GGCCAGGAGG AAATCACCCG CGACATTCCC AATGTCGGCG AAGAGGCCCT GAAGAACCTC
GACGAGGCGG GCATCGTCTA CATCGGCGCC GAGGTTCAGG CCGGCGACAT CCTGGTGGGC
AAGGTCACGC CCAAGGGCGA AAGCCCGATG ACCCCGGAAG AGAAGCTGCT GCGCGCCATC
TTCGGCGAAA AGGCGTCCGA CGTTCGCGAC ACCTCGCTGC GCATTCCCCC CGGCGTCACC
GGTACGGTGG TCGAGGTCCG CGTCTTCAAT CGCCGCGGCG TCGAAAAGGA CGAGCGCGCC
CTGGCCATCG AGCGCCAGGA GATCGAAAGC CTGGCCAAGG ACCGCGATGA CGAGCGCGCC
ATCTTGGAAG GCAGCTTCGC CCGCCGCCTG AAGGAACTGC TGATCGGCCA GAAGGTGGTC
GGCGGTCCGC GCGGCATGGC GACCGGCGGC GTGATCTCCG AGGATCTGCT GAGCGGCTAT
ACCGCCGCCC AGTGGCGCCA GATCGCCGTC GAGAACGACG AGACGGCGAC CGAGATCGAG
GGGCTGAAGA AGGCCTATGA GGAATCGATC GCCAAGATCC AGGAGCGCTT CGAGAACAAG
GTCGAGAAGC TCCAGCGCGG CGATGAACTG CCCCCGGGCG TTCTGAAGAT GGTCAAGGTG
TTCGTCGCGG TGAAGCGCAA GCTGCAGCCG GGCGACAAGA TGGCCGGCCG TCACGGCAAC
AAGGGCGTGA TCTCCAAGAT CAATCCGATC GAGGACATGC CCTATCTGGA AGACGGCACC
TACGTCGATA TCGTGCTCAA TCCCTTGGGC GTGCCGTCGC GTATGAACGT CGGTCAGATC
CTCGAGACCC ATCTCGGCTG GGCCTGTCGC GGTCTTGGCG CCCAGATCGG CGCCCTGCTC
GAACAGGTCA AGCGCGGCCT GATCCCGATC AACGATCTGC GCGAGAAGCT CGACGACGTG
TACGGTCCCC GTCACGCCAA AGAGGATCTG GCGCCGATGG GCGATGACCA GATCAAGGAA
CTGGCCTTCA ACCTGCGCTC GGGCGTGCCG ATTGCTACCC CGGTGTTCGA CGGCGCCCGC
GAGAGCGACA TCGTCGACAT GCTGCGCAAG GCGGGTCTTG ACTCCTCGGG TCAGGTCACC
CTGTCCGATG GCCGGACCGG CGAGCCGTTC GACCGCAAGG TCACGGTGGG CTATATTTAT
ATGCTGAAGC TCCATCACTT GGTCGACGAC AAGATCCACG CCCGTTCCAT CGGTCCCTAT
TCGCTGGTGA CTCAGCAGCC GTTGGGCGGC AAGGCCCAGT TCGGCGGCCA GCGCTTCGGC
GAAATGGAAG TGTGGGCGCT GGAAGCTTAC GGCGCGGCCT ATACCCTCCA GGAGATGCTG
ACGGTGAAGT CCGACGACGT GTCGGGCCGC ACCAAGGTCT ATGAGGCGAT CGTCAAGGGT
GACGATACCT TCGAGGCCGG CATCCCCGAG AGCTTCAACG TGCTGGTCAA GGAAATGCGC
TCCCTTGGTC TTGACGTTGA ATTGGGGCAA AGCAGCTTCT AA
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| Protein sequence | MTKSLTSRKR IRKDFGRIPT VAPMPNLIEV QKSSYDQFLQ IGVPVDKRTD SGLQEVFKSV
FPIRDFSGKG ELEFVAYELE EPKYDTDECQ QRGMTFAAPL KVTLRLLVWD VDEETGARSI
RDIKEQDVYM GDMPLMTSNG TFIINGTERV IVSQMHRSPG VFFDHDKGKT HSSGKFLFAA
RVIPYRGSWL DFEFDAKDMV YVRIDRRRKL PVTTLLYALE GAAATALREA RTAEGRSVDP
SEIAGMTSEE ILDFFYQKLS YKRDDKGWKV DFKPDHLRGV KLMFDLVDAA TGEVKIEAGT
KVTPRAARKL AEDGMTEMRV FTEELVGRYA AEDMINEASG EIYAEAGEEL TEAMLADMEK
AGFTELRVLH IDHVNVGPYV RNTLAMDKNT TREEALIDIY RVMRPGEPPT LETADALFKG
LFFDSERYDL SAVGRVKMNA RLGFTMQEAP DTMRVLRKED VLHIIRQLVE LKDGKGEIDD
IDHLGNRRVR SVGELMENQY RVGLLRMERA IRERMSSVDI DTVMPHDLIN AKPAAAAVRE
FFGSSQLSQF MDQTNPLSEI THKRRLSALG PGGLTRERAG FEVRDVHPTH YGRICPIETP
EGPNIGLINS LATFARVNQY GFIESPYRKV VEGTVTDEVT YMSAMEEGKY VIAQANAALT
EDGHFADDLI SCRKASDFEM VQPQDIDYID VSPKQLVSVA AALIPFLEND DANRALMGSN
MQRQAVPLVK AEAPYVGTGM EAAVARDSGA TIAAKRAGVV QQVDATRIVI RATEDLKIAE
SGVDIYRLQK FQRSNQSTCI NQRPLVKVGD LVGRGEILAD GPLTEMGELA LGRNVLVAFM
PWNGYNFEDS ILISERIVSD DVFTSIHIEE FEVMARDTKL GQEEITRDIP NVGEEALKNL
DEAGIVYIGA EVQAGDILVG KVTPKGESPM TPEEKLLRAI FGEKASDVRD TSLRIPPGVT
GTVVEVRVFN RRGVEKDERA LAIERQEIES LAKDRDDERA ILEGSFARRL KELLIGQKVV
GGPRGMATGG VISEDLLSGY TAAQWRQIAV ENDETATEIE GLKKAYEESI AKIQERFENK
VEKLQRGDEL PPGVLKMVKV FVAVKRKLQP GDKMAGRHGN KGVISKINPI EDMPYLEDGT
YVDIVLNPLG VPSRMNVGQI LETHLGWACR GLGAQIGALL EQVKRGLIPI NDLREKLDDV
YGPRHAKEDL APMGDDQIKE LAFNLRSGVP IATPVFDGAR ESDIVDMLRK AGLDSSGQVT
LSDGRTGEPF DRKVTVGYIY MLKLHHLVDD KIHARSIGPY SLVTQQPLGG KAQFGGQRFG
EMEVWALEAY GAAYTLQEML TVKSDDVSGR TKVYEAIVKG DDTFEAGIPE SFNVLVKEMR
SLGLDVELGQ SSF
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