Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A2694 |
Symbol | |
ID | 3836129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 3112980 |
End bp | 3117161 |
Gene Length | 4182 bp |
Protein Length | 1393 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637826800 |
Product | DNA-directed RNA polymerase |
Protein accession | YP_427778 |
Protein GI | 83594026 |
COG category | [K] Transcription |
COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGAAC TCATGAAGAT CTTTGGTCAG GTCAGCGGCA CCCAGGCGTT CGACCAGATC AAGATTTCCA TCGCCAGCCC GGAGAAGATC CGGTCGTGGT CCTTTGGTGA GATCAAGAAG CCGGAAACCA TCAACTACCG GACGTTCAAG CCGGAAAGGG ACGGTCTGTT CTGCGCCCGC ATTTTCGGGC CGATCAAGGA TTACGAGTGC TTGTGCGGCA AGTACAAGCG CATGAAATAC CGCGGCATTA TCTGCGAGAA GTGCGGCGTT GAAGTCACGC TCTCGAAGGT GCGCCGCGAG CGCATGGGCC ATATCGAACT GGCCGCCCCG GTCGCCCACA TCTGGTTCAT GAAGTCGCTG CCGTCCCGCG TCGGGCTGCT CATCGACATG ACCCTGAAGG ACCTCGAGCG GGTTCTCTAT TTTGAAAACT ACGTGGTGGT CGAGCCCGGC CTGACCCCGC TTAAGCTGCA CGAGATGCTC TCGGAAGAGC AGTATCAGCG CGCGGTCGAG GAATACGGCG AGGATTCGTT CACCGCCGGC ATCGGCGCCG AAGCCATCCG CGACATGCTG ATGAGCATCG ATCTTGAGAC CCTCAAGACC GATATGAAGG TCGAGCTGCG CGACACCACC TCGGAAGCCA AGCGCAAGAA GCTGGTCAAG CGGCTGAAGA TCGTCGACGC CTTCATCGAA TCGGGCTGCC GGCCCGAGTG GATGATCCTG GAAGTCATTC CGGTGATCCC GCCCGAGCTG CGTCCGCTGG TCCCGCTCGA TGGCGGCCGT TTCGCCACCT CCGACCTCAA CGACCTCTAC CGCCGCGTCA TCAACCGCAA CAACCGTCTG AAGCGGCTGA TCGAACTGCG CGCTCCCGAT ATCATCATCC GCAACGAAAA GCGGATGCTT CAGGAATCGG TCGACGCCTT GTTCGACAAC GGCCGTCGCG GCCGGGCGAT CACCGGGGCC AACAAGCGGC CGCTGAAGTC GCTGTCGGAT ATGCTCAAGG GCAAGCAGGG TCGCTTCCGT CAGAACCTGC TGGGCAAGCG CGTCGATTAC TCGGGGCGTT CGGTGATCGT GGTCGGACCG GAGCTGAAGC TCCACCAGTG CGGCCTGCCC AAGAAGATGG CGCTCGAGCT GTTCAAGCCC TTCGTCTATT CGAAGCTTGA GCAGTATCAC TACGCGACCA CCATCAAGGC GGCCAAGCGC ATGGTCGAGA AGGAGCGTCC CGAGGTTTGG GACATCCTGG AAGAGGTCAT CCGCGAACAC CCGGTGATGC TCAACCGCGC GCCGACGCTG CACCGCCTGG GCATCCAGGC CTTCGAGCCG GTGCTGATCG AAGGCAAGGC GATCCAGCTT CATCCGCTGG TGTGCACCGC CTTCAACGCC GACTTCGACG GCGACCAGAT GGCCGTCCAC GTCCCGCTGT CGCTCGAGGC TCAGCTCGAA GCCCGCGTGC TGATGATGTC GACCAACAAC ATCCTCAGCC CGGCCAACGG CAAGCCGATC ATCGTGCCGA CCCAGGATAT CGTGCTTGGC CTTTATTACC TGACCCTTGA TCGCGAAGGC GAGAAGGGCG AGGGCATGGC CTTCGCCTCG CTCAACGAGA TCGAGCATGC CTTGCAGGCC CGCGTCGTCA GCCTGCAGGC CCGGGTTAAG GCCCGCCTGC ATACGATCGA CGAGAACGGC GCCCCGGTCA TTCGCACGGT CGAGACCACC CCGGGCCGCA TGCTGCTGTC GCGGCTGTTG CCGCGCCACA CGGCGCTGCC CTTCTCGGTG ATCAACCGCC TGCTGCGTAA GAAGGACATC ACCGACGTCA TCGATACCGT CTACCGCCAC TGCGGTCAGA AAGAGACGGT GATCTTCTGC GACCGCGTCA TGCAGCTGGG CTATGCCCAC GCCGCGCGCG CCGGCATCTC GTTTGGCAAG GACGATCTGG TCATTCCGCC GACCAAGGCC CAGCTCGTCG CCGACACCGA CGCCGAGGTC AAGGAGTTCG AGCAGCAGTA CCAGGACGGC CTGATCACCC AGGGTGAAAA GTACAACAAG GTGGTCGACG CTTGGTCCCA TTGCACCGAG CGCGTCGCCG ACGAGATGAT GAAGGAGATC GCCAAGATCG AGCCGGGCAA GCCCGTCAAC TCGGTCTATA TGATGGCGCA CTCCGGCGCC CGTGGTTCGG CCGCCCAGAT GAAGCAGCTC GCCGGTATGC GCGGCCTGAT GGCCAAGCCG TCGGGCGAGA TCATCGAAAC GCCGATCGTG TCGAACTTCA AGGAAGGCCT GACCGTGCTG GAGTACTTCA ACTCCACCCA CGGCGCCCGT AAGGGTCTGG CCGATACCGC CTTGAAGACG GCGAACTCGG GGTATCTGAC CCGTCGTCTG GTTGACGTGG CCCAGGACGC GATCATCGTT ATCGAGGATT GCGGCACCTC GCGCGGCATC ACCGCCATGC CGGTGGTCGA AGGCGGCCAG ATCATCGCCT CGCTCGGCGA GCGGGTGCTG GGGCGGACCG CGGCCGAGGA CATCAAGGAC ACCGACGGCA CCATCATCGT GCCGCTGGGC AAGATGATCG AGGAACACGA CGTCGAACTG CTGGAAGAGG CGGGGATCGA GCAGGTGCGC ATCCGTTCGG TGCTGACCTG CGAGGCCGAG ACCGGCATCT GCGGCAAGTG CTACGGCCGT GATCTGGCGC GCGGCACCAA GGTCAACATC GGCGAGGCGG TGGGCGTCAT CGCCGCCCAG TCGATCGGCG AGCCGGGCAC CCAGCTGACG ATGCGGACCT TCCACATCGG CGGCGCCGCC CAGCGTGGCG CCGAGCAGTC GAGCGTGGAA GCGGCCTTCG ACGGCAAGAT CGTCATGGAG AACCGGGCGG TCGTCGGTAC CTCGGAAAAC GTTCTGATCG TCATGTCGCG CAATTGCGAG GTGAAGATCA CCGACGAGGC CGGCCGCGAA AAGGCCCGCT ACCGCATTCC CTATGGCTCC AAGCTGCTCA CCGATGAGGG CCGCATGGTG ACCAAGGGCG ATCGCTTGGC CGAGTGGGAT CCCTACACGG TGCCGATCAT CACCGAGCGC GAGGGTATCG CGATCTATAA CGATCTGGTC GAGGGCGTGT CCGTTCGCGA AGTCACCGAC GAGGCCACCG GCATTTCGTC GAAGGTGGTG GTCGAGTGGA AGAACATGCC CAAGGGCACC GACCTCAAGC CGCGCATCAC CTTGCGCGAT GACCGGGGCG AGGGCATCAC CCTGGCCAAC GGTCTGGAAG CCCGCTACTT CATGAGCGTC GACACCATCT TGTCGGTCGA GAACGGCCAG AGGGTGAAGG CCGGTGACGT GCTGGGCCGA ATTCCCCGCG AGGGATCGAA GACGCGTGAC ATCACCGGTG GTCTGCCGCG CGTGGCCGAG CTGTTCGAGG CGCGCAAGCC CAAGGATCAC GCCATCATCT CCGAGATCGA CGGTCGCGTC GAATTCGGCA AGGACTACAA GTCCAAGCGC CGCCTGCTGG TGGTGCCCGA GGATGGCGAT CCGGTGGAAT ACCTGCTGCC CAAGGGCAAG CATCTGACCA TTCAGGAAGG CGATTACGTC CGCAAGGGCG ATCCGCTGAT GGACGGCAAC CCGGTTCCCC ACGACATCTT GCGCGTGATG GGCGTCGAGG CGCTGGCCAA TTACCTGATC AAGGAAATCC AGGACGTCTA TCGTCTGCAG GGCGTGAAGA TCAACGACAA GCATATCGAA GTGATCTCGC GTCAGATGCT GCAGAAGGTG GAAATCACCG AGCCCGGCGA CACCACCTTC CTGGTGGGCG AGCTGATCGA TCGGACGGAC TTCCAGATCG AGAACGAGAA GACCCTGAAG GAAAACGGCC GCCCGGCCAA TTCCATCCCG GTTCTGCAGG GCATCACCAA GGCCTCCTTG CAGACCCACT CGTTCATCTC GGCCGCCTCC TTCCAGGAGA CCACCCGGGT GCTGACCGAG GCCGCCGTGT CGGGCAAGAG CGACAGCCTG ATGGGTCTGA AGGAGAACGT CATCGTCGGC CGCCTCATCC CGGCGGGAAC GGGCGCGATG ATGAATCGCC TGCGCGCCCT TGCCGCGACC CGCGACAAGG AAATCGAAGA CTCGCGCGGC GCCGAGATGG TTCCGGTTCT GGGCGCGGCC GAGTCTTTCA CGCCAAGACT GCCTGAACCG CCCGCCGAAT AA
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Protein sequence | MNELMKIFGQ VSGTQAFDQI KISIASPEKI RSWSFGEIKK PETINYRTFK PERDGLFCAR IFGPIKDYEC LCGKYKRMKY RGIICEKCGV EVTLSKVRRE RMGHIELAAP VAHIWFMKSL PSRVGLLIDM TLKDLERVLY FENYVVVEPG LTPLKLHEML SEEQYQRAVE EYGEDSFTAG IGAEAIRDML MSIDLETLKT DMKVELRDTT SEAKRKKLVK RLKIVDAFIE SGCRPEWMIL EVIPVIPPEL RPLVPLDGGR FATSDLNDLY RRVINRNNRL KRLIELRAPD IIIRNEKRML QESVDALFDN GRRGRAITGA NKRPLKSLSD MLKGKQGRFR QNLLGKRVDY SGRSVIVVGP ELKLHQCGLP KKMALELFKP FVYSKLEQYH YATTIKAAKR MVEKERPEVW DILEEVIREH PVMLNRAPTL HRLGIQAFEP VLIEGKAIQL HPLVCTAFNA DFDGDQMAVH VPLSLEAQLE ARVLMMSTNN ILSPANGKPI IVPTQDIVLG LYYLTLDREG EKGEGMAFAS LNEIEHALQA RVVSLQARVK ARLHTIDENG APVIRTVETT PGRMLLSRLL PRHTALPFSV INRLLRKKDI TDVIDTVYRH CGQKETVIFC DRVMQLGYAH AARAGISFGK DDLVIPPTKA QLVADTDAEV KEFEQQYQDG LITQGEKYNK VVDAWSHCTE RVADEMMKEI AKIEPGKPVN SVYMMAHSGA RGSAAQMKQL AGMRGLMAKP SGEIIETPIV SNFKEGLTVL EYFNSTHGAR KGLADTALKT ANSGYLTRRL VDVAQDAIIV IEDCGTSRGI TAMPVVEGGQ IIASLGERVL GRTAAEDIKD TDGTIIVPLG KMIEEHDVEL LEEAGIEQVR IRSVLTCEAE TGICGKCYGR DLARGTKVNI GEAVGVIAAQ SIGEPGTQLT MRTFHIGGAA QRGAEQSSVE AAFDGKIVME NRAVVGTSEN VLIVMSRNCE VKITDEAGRE KARYRIPYGS KLLTDEGRMV TKGDRLAEWD PYTVPIITER EGIAIYNDLV EGVSVREVTD EATGISSKVV VEWKNMPKGT DLKPRITLRD DRGEGITLAN GLEARYFMSV DTILSVENGQ RVKAGDVLGR IPREGSKTRD ITGGLPRVAE LFEARKPKDH AIISEIDGRV EFGKDYKSKR RLLVVPEDGD PVEYLLPKGK HLTIQEGDYV RKGDPLMDGN PVPHDILRVM GVEALANYLI KEIQDVYRLQ GVKINDKHIE VISRQMLQKV EITEPGDTTF LVGELIDRTD FQIENEKTLK ENGRPANSIP VLQGITKASL QTHSFISAAS FQETTRVLTE AAVSGKSDSL MGLKENVIVG RLIPAGTGAM MNRLRALAAT RDKEIEDSRG AEMVPVLGAA ESFTPRLPEP PAE
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