Gene Rru_A2627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A2627 
Symbol 
ID3836062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand+ 
Start bp3056801 
End bp3057406 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content68% 
IMG OID637826733 
Productpyridoxamine 5'-phosphate oxidase 
Protein accessionYP_427711 
Protein GI83593959 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0259] Pyridoxamine-phosphate oxidase 
TIGRFAM ID[TIGR00558] pyridoxamine-phosphate oxidase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.752106 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTCGC TTGAAGATAG AGACCCTTAC GCGCTGTTTG CCGAATGGCT GGAAGAGGCC 
GGGACGACCG AGCCCAACGA CCCCAACGCG ATGGCCCTGG CGACCTGCAC GCCCGAGGGG 
CGGCCGAGCC TGCGCATGGT GCTGCTCAAA GGCGTGATCG CCCAGGCTGA CGCCGAGGGC 
GGCTTCATTT TCTATACCAA TTTGGAAAGC CGCAAGGGCG GGGAGCTGCT GGCCAATCCC 
CATGCCGCCC TGTGCTTCCA TTGGAAATCC CTGCGTCGGC AGGTCCGGGT CGAGGGACCG 
GTGGTCGCCG TCAGCGACGC CGAGGCCGAC GCCTATTTCG CCTCGCGCCA CCGCGACAGC 
CGGATCGGCG CCTGGGCGTC GATGCAGTCG CGCCCGCTCC AGGGCCGCTT CGAGCTCGAA 
CGCCGCGTCG CCCAGTTCGC CGCCCGCTAC GCCGTGGGCG CCGTCCCCCG TCCGCCCCAT 
TGGTCGGGCT TCCGCGTGGT GCCCGAGGTT ATCGAATTCT GGCACGACCG CCCCTTCCGG 
CTGCATGACC GGGTGGTGTA TCGTAGCGAG GGAAGCGGCT GGACCCACAG CCGGCTTTAT 
CCCTAA
 
Protein sequence
MSSLEDRDPY ALFAEWLEEA GTTEPNDPNA MALATCTPEG RPSLRMVLLK GVIAQADAEG 
GFIFYTNLES RKGGELLANP HAALCFHWKS LRRQVRVEGP VVAVSDAEAD AYFASRHRDS 
RIGAWASMQS RPLQGRFELE RRVAQFAARY AVGAVPRPPH WSGFRVVPEV IEFWHDRPFR 
LHDRVVYRSE GSGWTHSRLY P