Gene Rru_A2620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A2620 
Symbol 
ID3836055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp3048958 
End bp3049752 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content69% 
IMG OID637826726 
Producthemolysin A 
Protein accessionYP_427704 
Protein GI83593952 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACGACG ACACGGCGGC CGATGACCGG CGCCCCCCGG GCGACAAGCG CCCGGGCAAG 
CTGCGCCTTG ACCAGCTTCT GGTCGATCGC GGGCTGGTCG AAAGCCGGGC CAAGGCCCAG
GCGGTGATTC TGGCCGGGCT GGTGTTTTCG GGCGAGCGGC GGCTGGAAAA GGCCGGCGCC
CCGGTGGCCG CCGATCTGGC CATCGATGTC CGGGGCCAGC CCCATCCCTG GGTGTCACGC
GGCGGTATGA AGCTTGATAA GGGGTTGGAC AGCTTCGGCT TTTCCGCCGA AGGCCTGACC
TGCCTCGATG TCGGCGCCTC GACCGGCGGT TTTACCGATG TTCTGCTGAC CCGGGGAGCG
GCCAAGGTCT ATGCCGTCGA TGTCGGCTAT GGCCAGCTGG CCCACAAGCT GCGCACCGAT
GAGCGGGTTA TCGTTCTGGA ACGCACCAAC GCCCGCCACC TTGACGCCAC GCTGATCCCC
GAGCCGGTGG GCGCCGTGGT CTGCGACGCC AGCTTCATCG GCCTGCGCAC CGTTTTGCCC
GCCGCCCTGG GCCGGGCGGC GCCGGGGGCC TTTCTGGTCG CCCTGATCAA ACCGCAGTTC
GAGGTCGGCC GCGAGCGCGT CGGCAAGGGC GGCGTCGTCC GCGATCCCGC CCTTCACGCC
GAAGTCTGCA CCACCATCAC CGACTGGCTG GCCGCCCTGC CCGGCTGGAG CGTCGTCGGC
CTGACCGAAA GCCCGATCAA GGGCCCGGAA GGCAACATCG AATTCCTCAT CGGCGGCCGC
TTCTCCGGGG TGTGA
 
Protein sequence
MNDDTAADDR RPPGDKRPGK LRLDQLLVDR GLVESRAKAQ AVILAGLVFS GERRLEKAGA 
PVAADLAIDV RGQPHPWVSR GGMKLDKGLD SFGFSAEGLT CLDVGASTGG FTDVLLTRGA
AKVYAVDVGY GQLAHKLRTD ERVIVLERTN ARHLDATLIP EPVGAVVCDA SFIGLRTVLP
AALGRAAPGA FLVALIKPQF EVGRERVGKG GVVRDPALHA EVCTTITDWL AALPGWSVVG
LTESPIKGPE GNIEFLIGGR FSGV