| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2602 |
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| Symbol | |
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| ID | 3836037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 3024243 |
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| End bp | 3026708 |
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| Gene Length | 2466 bp |
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| Protein Length | 821 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637826708 |
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| Product | periplasmic sensor diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_427686 |
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| Protein GI | 83593934 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.981615 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGATCC GCCTGAAAAC AGCTCTGCTG TCGGGGATTC TCCTCGCCAT TCTGGTCAGT
GGACTGGGGG GCGTGTTGTG GACGGTTGTC CGCCCCGGCT TCCAGGACAT CGAGCGGGCC
AGGGCCGCCG ACCACATGAC CGCCCTGCTC GCCGCCATCT CGGCTGATAT CGACAGCATC
GGCACCTTCA TCCTCAGCTA TTCTTCGTGG GATGAAACCT ATGCCTTCGT GCGGACGGGC
GATCCCACCT ATGTCGCCAA TAATCTCGCG GTGGAAGGGG CGAAAAACGC CCAGAGCCAT
TTCGCCCTGG TCCTCACCCC CAAGGGGCGG ACGGTGTTTT CCAGGCTGTG GAACGACGAC
TTCACCGCGA CTCTGCCCCC TCCCGACGCC GCCGGCGGCG GCTTGCCCGC CAACCATCCG
CTGATGGCGG CGCTCTCCCA CCCCGAAGGC GTCCGCGGCC TTTTGCAAAC CCCCCGGGGG
CCGTTGGCGG TGGCGGCCCG GCCGATCCTG CCCAGCAACG AACACGGTCC GCCCCGCGGG
GTCCTGGTGT TCGGCCGCTG GCTAACCCAT GCGCTGAGCG ACCACCCGCC GCTCCCCCAC
CTGTCCCCTC TCCGGCTGTG GCTGGCCCCG GCCCCGGGCG ACGCGCCGGA AAACGTGCGG
CGGCTGCTGG CCGCCGATGG CCCCGATCTG GAGATCGACG GCATCGGCGA GCCAACGTCC
TTGGTCACCG CCGGCATCCG CCTTGTCGAT CTGGAGGGGG CGCCCGTCGC CGCTCTCACC
ACCACGCTGG CCAAAACGGT TGAACCCCAA GGGGAGTCCA TCATCCGCCT CGCCCTGGTG
ATCGCCGCCC TTGGCAGCCT GGGGGTGGTG GCCGTGGGGC TGGTGAGCAA TCACCTGATG
ATCGTCGCCC CTCTGCGCCG CCTGGAAAGC CACATCACCA CCCTGTCGCG CACCGGGGAT
CTCGATACCC GTCTGGTGCT CGACCGCAAG GACGAAATCG GCCTGCTCGC CCGCGCCTTC
GCCACCATGC AGGGCCGCAT TCGCCATCTC GCCCATTACG ACCCCCTGAC CGGCTTGCCC
AACCGAACCC TGTTCACCAT GCTTGGCGAA GGCGCCCTAG CCCGGCGGCG GGCCGATCGC
AACGGCGGGG GTCGGCGGGT CGGCGTGGCG ATCCTTGATC TCGATCGCCT GAACACCCTG
ACGATCGGCC TCGGGCAAGG CGGTAGCGAG CGGGCCCTGG TGGCGGTCGG CCGTCGGCTG
GCCGCCCTGG CCGGTCCGGC CGATGTGGTG GCGCGCGGCG GGGATGGCCG CTTTCTCGTT
CTGCTTGGCG ATCTCGCGCC CGCTCAAGCC GGCTCGATCG TCGAACGCGA GGCGGCCGAA
AGGCTGGCCT CGGCTTTCGC CAAGCCTTTC ACCCCCGACG ATCTCGTCGG CGCGCCGCTT
TCCCTGACGG CCAGCATCGG TCTCGCCCTT TTTCCCCAAG ACGGCGAGAC CCTGGAAACC
CTGGTCACCC ATGCCGAAGT CGCCGTCCAT CAGGCCAAGC TCCTCGGGCG TAATAACTTC
CAGTTCTTCG ATGACACCCT CAATCGCCAA GCGCGCGAAA TCCTCGCCCT GGAAAGCGCC
CTTTACGAGG CTCTCGCCGA CAACACCTTG TCGCTGTGTT TCCAGCCGCG GATCGATGCC
GTGCGCGGCC ACGCCATCGA GCTGAAGGCC CTGGCCCGCT GGGACCATCC CAGCCGCGAT
CTGATCGTCC TTGAGGACGT CTTGCCCCTG ATCAAACAGG ACGGGCTTCT GGCCGAGATC
GACCGCTGGA TGAGCAACGC CGCCTGCCGC CAGATCCGTC AATGGCGCGA TCAGGGCGTC
AGCTTTCCGC CAATCGCCAT CGCCCTGTCG GCCCGCCCCC TGACCGCCGG CGACCCGGGT
TTGGCCCCGA TCGCCGAAGC GATCGCCGCC AATGGCGTCG ATCCCGGCGA TCTCGCCGTC
GAGATCGCCC AAAGCGCGAT CAAAGGGCAA TTTCCCGAAA CCAAGGCTCC TGAAACCCAG
GCTCCCGAAG ACCGGCCCGC CGAGGAACTC CCCTGGCCCG ACGGGCTGGC CGGCCTTGGG
CTCGGCCTTG TCATCGATGT CGCCGACGCC GGCGTCGTCT CGCCCGCGCT CTTGCGCCGT
TTCCCGCTGA CCCGGCTGAC GATCGGCGCC GCCCTGGTCG CCAAACTGCC CGATTGCCGC
GAAAGCCGCG CCCTCGTCCG CGCCCTGATC GCCCTGGCCG ATGAACTCGA TCTCGAGTGT
CTGGCCGAAG GGGTGGAGCG CGGCGATCAG GCCGACTGGC TGCTGGCGGC GGGCTGCCGC
CTTCAACAGG GCCTTTTTCA CGCCCGCCCC CAGGATCAGA CGGTCATCTT GCGCTGGCTT
GGCCAGACGC CGCCGCGCGG CCTCTCCTCC CCCGGCCCCC GGGACCGCAA ACAGGACGGC
GTTTGA
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| Protein sequence | MSIRLKTALL SGILLAILVS GLGGVLWTVV RPGFQDIERA RAADHMTALL AAISADIDSI
GTFILSYSSW DETYAFVRTG DPTYVANNLA VEGAKNAQSH FALVLTPKGR TVFSRLWNDD
FTATLPPPDA AGGGLPANHP LMAALSHPEG VRGLLQTPRG PLAVAARPIL PSNEHGPPRG
VLVFGRWLTH ALSDHPPLPH LSPLRLWLAP APGDAPENVR RLLAADGPDL EIDGIGEPTS
LVTAGIRLVD LEGAPVAALT TTLAKTVEPQ GESIIRLALV IAALGSLGVV AVGLVSNHLM
IVAPLRRLES HITTLSRTGD LDTRLVLDRK DEIGLLARAF ATMQGRIRHL AHYDPLTGLP
NRTLFTMLGE GALARRRADR NGGGRRVGVA ILDLDRLNTL TIGLGQGGSE RALVAVGRRL
AALAGPADVV ARGGDGRFLV LLGDLAPAQA GSIVEREAAE RLASAFAKPF TPDDLVGAPL
SLTASIGLAL FPQDGETLET LVTHAEVAVH QAKLLGRNNF QFFDDTLNRQ AREILALESA
LYEALADNTL SLCFQPRIDA VRGHAIELKA LARWDHPSRD LIVLEDVLPL IKQDGLLAEI
DRWMSNAACR QIRQWRDQGV SFPPIAIALS ARPLTAGDPG LAPIAEAIAA NGVDPGDLAV
EIAQSAIKGQ FPETKAPETQ APEDRPAEEL PWPDGLAGLG LGLVIDVADA GVVSPALLRR
FPLTRLTIGA ALVAKLPDCR ESRALVRALI ALADELDLEC LAEGVERGDQ ADWLLAAGCR
LQQGLFHARP QDQTVILRWL GQTPPRGLSS PGPRDRKQDG V
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