| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2544 |
|---|
| Symbol | |
|---|
| ID | 3835978 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 2957617 |
|---|
| End bp | 2959086 |
|---|
| Gene Length | 1470 bp |
|---|
| Protein Length | 489 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637826652 |
|---|
| Product | Signal transduction histidine kinase |
|---|
| Protein accession | YP_427631 |
|---|
| Protein GI | 83593879 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3920] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGATC CCGTGGTCCT CTCCGAGCTT CGCCGACGCC TTGCCGAAGC CGAGGAAACC
TTGAACGCCA TCCGCGAGGG CGAGGTGGAC GCCCTGGTGA TCGGCGAAGG CGGTGTCGAC
GAGGTTTTCG CCATCGGCGG CGATACGGAA TCCTATCGCA CCTTCATGGA GGCCATGGAT
ACCGGCGCCG CCGCCGTCGA TGAGGACGGG CGGGTGCTTT ATGCCAATAG CGCGCTCTGT
CGCTTGATCG ATCACCCGCT GCCGACCCTT CAGGGCAAAC CGCTGGTTTC CTTCTTCGAC
GCCCGCGCGG CGGCCGAGAT CGGCCAGATG GTGGGGAAAA CCGCGAACCA GCGCGAAAAG
GTCGAGATTT CCTTGAAAGA CGCGGCGACA AAGATGGCGC AGGTCTTTCT GGTCTCGGCC
AAGCCGGTGC GTCTGGGGCT GGTCCAGGGA CACGCCGTGA CCTTTACCGA TTTGACCGAA
CGCGTCAGGT CGGAGACCGC GGAACGGGCC GAACGCATCG CCGCGGCGAT CATCGCCTCG
GCCAATGAAA TCGTCGTCGT CTGTGACCGC GTCGGCATGA TCACCCATGC CAATTCGGCC
GCCAGCGCCA TCTATGACGG CGATCTCATC GGCAAGATGT TCGAAGACGC CATTCCTTTG
ACCTTCACCG ACGCCCCCGA TCTGATGAGC GGCGGCGCCC TGATCGATCT GGCCTTGAAC
GGCCAAGCGC GCCAGGGCAT CGAGGCGATC GCCACCCGGG CGCCGAAGGT CAAGGACTAT
CTGATCAGCG CCGCCCCCCT TCAGGTGACC GAGGACCAGA TCAGCGGCTG CGTTCTGACC
ATGGTCGATC TGTCCCAACG CAAGGCGGCC GAACACCAGC AACTTCTGCT GATGCGCGAG
CTTGACCACC GCGTCAGGAA TACCCTGGCC CTGGTTCTGT CGATCAGCAA TCGCACCCTT
TCCAACGAGG ATACCCTGCA GGGGTTCCAT CAGGCCTTTA CCCAACGCAT TCACGGCTTG
GCCGCCACCC ATAGCCTGCT GGCCAAGCAG GGCTGGACCA AGCTGTCGCT GCACGACATC
GTCCGCGCCG AACTGGCCCC TTACGTGGAA ACCGACGGAA CGCGGCTGCG TCTGGAGGGC
GGGGAGGTGG CGCTTATCCC CCGCGCGGCG ATCGCCCTTG GCCTGATCTT CCATGAATTG
GCGACGAACG CCGTGAAATA CGGCGCCCTG TCGCGCGAGG GCGGGCATGT TCTCGTCGCG
GTCAGGGGCC CCACCGCCGA TGGCGCGGCC ATGCGGGTGG ACTGGGTTGA ATCCGGGGGG
CCGATGGTGT CTCCGCCCCA GCGCAAGGGC TTTGGTCACA CCGTGATCTC CCACAGCCTC
GCCTATTCCA GCAAGGGCGG GACCGATCTG AGCTTCCCGC CCGAAGGCGT GATCTGCGCC
TTGCGGATTC CGATGGAAGA CATTCCCTGA
|
|---|
| Protein sequence | MNDPVVLSEL RRRLAEAEET LNAIREGEVD ALVIGEGGVD EVFAIGGDTE SYRTFMEAMD
TGAAAVDEDG RVLYANSALC RLIDHPLPTL QGKPLVSFFD ARAAAEIGQM VGKTANQREK
VEISLKDAAT KMAQVFLVSA KPVRLGLVQG HAVTFTDLTE RVRSETAERA ERIAAAIIAS
ANEIVVVCDR VGMITHANSA ASAIYDGDLI GKMFEDAIPL TFTDAPDLMS GGALIDLALN
GQARQGIEAI ATRAPKVKDY LISAAPLQVT EDQISGCVLT MVDLSQRKAA EHQQLLLMRE
LDHRVRNTLA LVLSISNRTL SNEDTLQGFH QAFTQRIHGL AATHSLLAKQ GWTKLSLHDI
VRAELAPYVE TDGTRLRLEG GEVALIPRAA IALGLIFHEL ATNAVKYGAL SREGGHVLVA
VRGPTADGAA MRVDWVESGG PMVSPPQRKG FGHTVISHSL AYSSKGGTDL SFPPEGVICA
LRIPMEDIP
|
|---|
| |