| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2479 |
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| Symbol | |
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| ID | 3835913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 2879737 |
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| End bp | 2881935 |
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| Gene Length | 2199 bp |
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| Protein Length | 732 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637826587 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_427566 |
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| Protein GI | 83593814 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGGA TTCCCGATTT CTCCAGGGTC GACCTTGAGG GGGGCGAGGC CCCCGGTTCG
GCCGATCTGT GGACCGACCG GATCGAGCAT CGCGCCGGCA AGGCGGTGCG CGACCTGCTG
TGGACGGCGC CCGAGAAGAT CGACGTCAAG CCGCTCTATC AGGCCTCCGA TCTCGACGGC
CTGGATTTCC TCGATACCTA TCCGGGCGCG CCGCCGTTCC TGCGCGGCCC CTATCCCAGC
ATGTATGTCA ATCAGCCGTG GACGGTGCGC CAATACGCCG GTTTCTCCAC CGCCACCGAA
TCCAACGCCT TTTACCGGCG CAATCTGGCC GCCGGCCAGA AGGGCCTGTC GGTGGCCTTC
GATCTGGCGA CCCATCGCGG CTATGACAGC GACCACCCCC GGGTGGCCGG CGATGTCGGC
ATGGCCGGCG TGGCCATCGA CAGCATCTTC GACATGCGCA CGCTGTTTGC CGGCATCCCG
CTTGATAAGA TGAGCGTGTC GATGACCATG AACGGCGCCG TCTTGCCGAT CATGGCCTTG
TTCATTCTGG CCGGCGAGGA ACAGGGCGTT AGCCCCGAGC AACTGTCGGG CACCATCCAG
AACGACATCC TCAAAGAATT CATGGTGCGC AACACCTATA TCTATCCGCC CACGCCCTCG
ATGCGGATCA TCAGCGATAT CTTCGCCTAT ACCTCCACCA AGATGCCGCG CTTCAATTCG
ATCTCGATTT CCGGCTATCA CATGCAGGAA GCCGGGGCGA CCGCCGATCT GGAACTGGCC
TATACCCTGG CCGACGGCGT GGAATACGCC CGCGCCGGTC TGGCCGCCGG GCTGACGATC
GACGCCTTCG CCCCGCGCCT GTCGTTCTTC TGGGCGATCG GCATGAACTT CCCCATGGAA
GTCGCCAAGA TGCGCGCCGC CCGCCTGCTG TGGGCCAAGC TGATCAAGGA CTTCAAACCC
AAAAGCGACA AATCGCTGTC GCTGCGCACC CATTGCCAGA CCTCGGGCTG GTCGCTGACC
GCCCAGGATG TGTTTAACAA CGTGACGCGC ACCTGCGTCG AGGCGATGGC GGCGACCCAG
GGCCATACCC AGTCGCTCCA TACCAACGCC CTGGACGAGG CCCTGGCCCT GCCCACCGAT
TTCTCGGCGC GCATCGCCCG CAACACCCAG TTGTTCTTGC AGCAGGAAGC CGGAACCTGC
CGGGTGATCG ACCCCTGGGG CGGCAGTTAC TATATCGAGC GGTTGACCCA TGATCTGGCC
GCCCGCGCCT GGCATTACAT CCAGGAGGTC GAGGAGACTG GCGGCATGGC CAAGGCCATC
GAGGCCGGCA TCCCCAAGAT GCGCATCGAA GAGGCCTCGG CCCGCACCCA GGCGCGCATC
GACAGCGGCC GTCAGACGGT GGTCGGCGTC AATAAGTACA AGGTCGACGA GGATCGTTCG
ATCGAGGTGC TGAAGGTCGA GAACGCCTCG GTCCGCCGCC AGCAGATCGA GCAACTCGAA
CGCCTGCGCG CCGAGCGCGA TCCGGCCAAG GTCGAAGAGA AACTGGCGGC CCTGACCCAT
TCGGCGCAAA GCGGCGAAGG CAATCTTCTG GCCCTGGCCG TCGATGCCGT GCGCGAAAAG
GCGACGGTGG GCGAGGTCTC CCTGGCCCTG GAAAAGGTCT GGGGCCGTCA CAAGGCCGAA
ATCCGGGCGA TTTCGGGCGT CTATAGCAGC GAGGTCGGGT CGATGGCCGA AAAGGTGGCA
AGCATCCGTC ATCTGGTCGA GGAGTTCGAG GCCAATGACG GCCGCCGTCC GCGCATCCTG
ATCGCCAAGA TGGGCCAGGA CGGCCACGAT CGCGGCCAGA AGGTGATCGC CACCGCCTTC
GCCGATCTCG GCTTCGATGT CGATATCGGC TCGCTGTTCC AAACCCCGGC CGAAACCGCC
CGTCAGGCGG TGGAGAACGA TGTCCATGTG GTCGGCGCCT CGTCGCTGGC CGCCGGCCAT
CTGACCCTGG TACCGCAGTT GCGCGAGGAA TTGCGCAAGC AGGGCCGCGA AGACATCATG
ATCGTCGTCG GCGGGGTGAT CCCGCCCCAG GATTTCGACG CCCTCTATAA GGCCGGGGCC
GAGGCGATCT TTCCGCCCGG CACCAATATC GCCGAATGCG CCGTTGATCT GATGGGCAAG
CTCAACGCCC GCCTAGGCTA TACCAGCAAG GCCGCGTAA
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| Protein sequence | MSRIPDFSRV DLEGGEAPGS ADLWTDRIEH RAGKAVRDLL WTAPEKIDVK PLYQASDLDG
LDFLDTYPGA PPFLRGPYPS MYVNQPWTVR QYAGFSTATE SNAFYRRNLA AGQKGLSVAF
DLATHRGYDS DHPRVAGDVG MAGVAIDSIF DMRTLFAGIP LDKMSVSMTM NGAVLPIMAL
FILAGEEQGV SPEQLSGTIQ NDILKEFMVR NTYIYPPTPS MRIISDIFAY TSTKMPRFNS
ISISGYHMQE AGATADLELA YTLADGVEYA RAGLAAGLTI DAFAPRLSFF WAIGMNFPME
VAKMRAARLL WAKLIKDFKP KSDKSLSLRT HCQTSGWSLT AQDVFNNVTR TCVEAMAATQ
GHTQSLHTNA LDEALALPTD FSARIARNTQ LFLQQEAGTC RVIDPWGGSY YIERLTHDLA
ARAWHYIQEV EETGGMAKAI EAGIPKMRIE EASARTQARI DSGRQTVVGV NKYKVDEDRS
IEVLKVENAS VRRQQIEQLE RLRAERDPAK VEEKLAALTH SAQSGEGNLL ALAVDAVREK
ATVGEVSLAL EKVWGRHKAE IRAISGVYSS EVGSMAEKVA SIRHLVEEFE ANDGRRPRIL
IAKMGQDGHD RGQKVIATAF ADLGFDVDIG SLFQTPAETA RQAVENDVHV VGASSLAAGH
LTLVPQLREE LRKQGREDIM IVVGGVIPPQ DFDALYKAGA EAIFPPGTNI AECAVDLMGK
LNARLGYTSK AA
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