| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2427 |
|---|
| Symbol | |
|---|
| ID | 3835861 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 2827107 |
|---|
| End bp | 2827832 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637826535 |
|---|
| Product | LrgB-like protein |
|---|
| Protein accession | YP_427514 |
|---|
| Protein GI | 83593762 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1346] Putative effector of murein hydrolase |
|---|
| TIGRFAM ID | [TIGR00659] conserved hypothetical protein TIGR00659 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGGCC TTCCCGGCGA AATCCACGAC CTGTGGGTCT ATCTGCACGC GACGCCGCTG
TTCTGGCTGA CCGTCACCTT GCTCGCCTAT CTGATCGGGC TGGGGCTGCA CAGCGTCGCC
CGCCTCAATC CGCTGGTCAA TCCGGTGGCC ATCGCCGTTT TGTTGCTTGT CGGCCTGCTG
AAGATCACCG GAACGGACTA TCACGACTAT TTCTCCGGGG CCCAGTTCGT TCACTTTCTG
CTCGGTCCGG CGACGGTGGC GCTGGCCGTT CCGCTGTTTG AAAACATCGG CAAGGTGCGT
CAGGCGCTGA TCCCGATGGG GATCGCCCTG GTCGTCGGCT CGACGGTGGC GGCGGGTTCG
GCGATGGGGC TGGCCGCCCT GACCGGCGCC ACGCCCGAGG TGTTGCTGTC GATGGCGCCG
AAATCGGCGA CGACACCGAT CGCCATGGGC ATCAGCGAGA GCATTGGCGG CCTGCCCGAA
CTGACGGCGG TGATGGTGAT CCTGACCGGC GTGCTGGGCG CGGTGATCGT CACCCCTTTG
ATGACTCTCC TTGGCATCAA GGATATGCGG GCGCGGGGCT TCGCCGCCGG GGTCGCCGCC
CATGGCCTGG GCACGGCGCG CGCCTTCCAG GTCGACCCGC TGGCCGGCAC CTTCGCCGGC
ATCGGCATGG GCATGAACGG CCTGATGACC ACCCTGGTGG TCGCGGTGCT GGTGGGATTC
TTCTAG
|
|---|
| Protein sequence | MNGLPGEIHD LWVYLHATPL FWLTVTLLAY LIGLGLHSVA RLNPLVNPVA IAVLLLVGLL
KITGTDYHDY FSGAQFVHFL LGPATVALAV PLFENIGKVR QALIPMGIAL VVGSTVAAGS
AMGLAALTGA TPEVLLSMAP KSATTPIAMG ISESIGGLPE LTAVMVILTG VLGAVIVTPL
MTLLGIKDMR ARGFAAGVAA HGLGTARAFQ VDPLAGTFAG IGMGMNGLMT TLVVAVLVGF
F
|
|---|
| |