Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A2397 |
Symbol | |
ID | 3835831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 2788224 |
End bp | 2788763 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637826505 |
Product | sigma-24 (FecI) |
Protein accession | YP_427484 |
Protein GI | 83593732 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.103635 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACGGATG TGAAAGACTC CCTTGATCTG TTCCTTCGGC ATCGAAGGGC TTTGATCGAT TATGCTACCC CAATTGTCGG CGACTCGATG CGGGCCGAGG ATGTGGTTCA GGAGGCATGG TTGCGATTCG ATTCGGCCTC GCCTTCGCCG ACATCCACCG AAGCCGGGCG CGGGACGGCC CTCGAACGCC CCGTCGGCTA CCTATACAAG ATCGTGCGCA ATCTCGCGGT GGACCTGTCT CGGCGACTGA AACGGGAGGC CTGGATGGGC GATGGCGGGG CCAGTCTGGA CGGGGTGGCG GCCGGCGCCC CGTCGCCCGA ACAAGAGGCG ATCGGCCGCG ACGACCTGCG CGCCGTCGCC CAGGCCCTGG CCAGCCTGCC GCCCCGCACG CGGACCGCTT TTGATCTGCA CCGCTTCGAA AATTGCACCT TTGCCGAAAT CGGCCAGCGC CTGGGCATCT CGCAGACCCG CGCCCATAGC CTAGTCCACG AGGCTTTGGC CCATTGCCTC GATCACCTCG ATCGGAGTTC AAAGCTTTGA
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Protein sequence | MTDVKDSLDL FLRHRRALID YATPIVGDSM RAEDVVQEAW LRFDSASPSP TSTEAGRGTA LERPVGYLYK IVRNLAVDLS RRLKREAWMG DGGASLDGVA AGAPSPEQEA IGRDDLRAVA QALASLPPRT RTAFDLHRFE NCTFAEIGQR LGISQTRAHS LVHEALAHCL DHLDRSSKL
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