Gene Rru_A2397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A2397 
Symbol 
ID3835831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp2788224 
End bp2788763 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content64% 
IMG OID637826505 
Productsigma-24 (FecI) 
Protein accessionYP_427484 
Protein GI83593732 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.103635 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGGATG TGAAAGACTC CCTTGATCTG TTCCTTCGGC ATCGAAGGGC TTTGATCGAT 
TATGCTACCC CAATTGTCGG CGACTCGATG CGGGCCGAGG ATGTGGTTCA GGAGGCATGG
TTGCGATTCG ATTCGGCCTC GCCTTCGCCG ACATCCACCG AAGCCGGGCG CGGGACGGCC
CTCGAACGCC CCGTCGGCTA CCTATACAAG ATCGTGCGCA ATCTCGCGGT GGACCTGTCT
CGGCGACTGA AACGGGAGGC CTGGATGGGC GATGGCGGGG CCAGTCTGGA CGGGGTGGCG
GCCGGCGCCC CGTCGCCCGA ACAAGAGGCG ATCGGCCGCG ACGACCTGCG CGCCGTCGCC
CAGGCCCTGG CCAGCCTGCC GCCCCGCACG CGGACCGCTT TTGATCTGCA CCGCTTCGAA
AATTGCACCT TTGCCGAAAT CGGCCAGCGC CTGGGCATCT CGCAGACCCG CGCCCATAGC
CTAGTCCACG AGGCTTTGGC CCATTGCCTC GATCACCTCG ATCGGAGTTC AAAGCTTTGA
 
Protein sequence
MTDVKDSLDL FLRHRRALID YATPIVGDSM RAEDVVQEAW LRFDSASPSP TSTEAGRGTA 
LERPVGYLYK IVRNLAVDLS RRLKREAWMG DGGASLDGVA AGAPSPEQEA IGRDDLRAVA
QALASLPPRT RTAFDLHRFE NCTFAEIGQR LGISQTRAHS LVHEALAHCL DHLDRSSKL