Gene Rru_A2360 details

Gene Information

• Locus tag: Rru_A2360
• Symbol: dppF
• ID: 3835794
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodospirillum rubrum ATCC 11170
• Kingdom: Bacteria
• Replicon accession: NC_007643
• Strand: +
• Start bp: 2747090
• End bp: 2748124
• Gene Length: 1035 bp
• Protein Length: 344 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 637826468
• Product: dipeptide transporter ATP-binding subunit
• Protein accession: YP_427447
• Protein GI: 83593695
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG4608] ABC-type oligopeptide transport system, ATPase component
• TIGRFAM ID: [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTCCTG CGATCCCCAC CGCGCATTCC CCCCTGCCGG GGACCGAGGC CGTGATGCCG 
GTTCTCGAGG CCCAGGGGCT GACCAAGCGC TATTCGGTGG CCCGTGGTCC CTTCAAGGAC 
GACGCCACCG TCCACGCCCT GACCGATGTA TCGTTCCGTC TGGCGCCGGG CCGCACCCTG 
GCCGTCGTCG GTGAATCGGG CTGCGGAAAA TCGACCCTCG CCCGTCAGGT CACCCTGATC 
GAGGAGCCGA GCGAAGGAAC CTTGCGGATC AATGGCAAGG CCGTGGCCTT TGCCGACGAG 
GCCGCCGTCA AGGACGCGCG GCGCAGCGTC CAGATCGTTT TCCAAGATCC CTATGGCTCG 
CTCAATCCGC GCTGGAAGGT GCGGACCATC CTGGACGAGC CGCTGGCGAT CAACACCACC 
CTGGGCGCGG CCGAGCGGCG CGAAAAGGTC GCCGAGATGA TGGCCCGGGT CGGGCTGCGT 
CCCGAATTCG CCACCCGCTA TCCCCATATG TTTTCCGGCG GTCAGCGCCA GCGCATCGCC 
ATCGCCCGCG CCCTGATGCT CAATCCCCGG GTGGTGGTGG CCGACGAGCC GGTTTCGGCG 
CTCGATGTGT CGGTGCAGGC CCAGGTGCTG AATTTGCTGA TGGATCTTCA GCAGGATTTC 
GGCGTCGCCT TCCTGTTCAT CAGCCACGAC CTGTCGGTGG TCCGCCACAT CAGCAACGAT 
CTGATGGTGA TGTATCTGGG GCGGGTGGTC GAGATGGGCC CCAAGGAGGC GATCTTCGGC 
GCCCCGGCCC ACCCCTATAC CCAGGCGCTG ATGGCCGCCA CCCCCAAGCT TGATCCCGGC 
GCCCGGCGCA GCCGCGAGCC GCTGAAGGGC GAATTGCCCT CGCCCCTCTC CCCGCCGCCC 
GGCTGCACCT TCCACACCCG TTGCCCGCTG GCGGTGGCGA TGTGCAAGCA GCAGATCCCG 
ACGCTCCGCC CGGTCGGCGG CCGCGAGGTG GCCTGCCACC GGGCCGAGGA CGCCTTGGAC 
AGCCCGCGCG TCTAA 

 

Protein sequence

MTPAIPTAHS PLPGTEAVMP VLEAQGLTKR YSVARGPFKD DATVHALTDV SFRLAPGRTL 
AVVGESGCGK STLARQVTLI EEPSEGTLRI NGKAVAFADE AAVKDARRSV QIVFQDPYGS 
LNPRWKVRTI LDEPLAINTT LGAAERREKV AEMMARVGLR PEFATRYPHM FSGGQRQRIA 
IARALMLNPR VVVADEPVSA LDVSVQAQVL NLLMDLQQDF GVAFLFISHD LSVVRHISND 
LMVMYLGRVV EMGPKEAIFG APAHPYTQAL MAATPKLDPG ARRSREPLKG ELPSPLSPPP 
GCTFHTRCPL AVAMCKQQIP TLRPVGGREV ACHRAEDALD SPRV