Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A2339 |
Symbol | |
ID | 3835767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 2710557 |
End bp | 2712305 |
Gene Length | 1749 bp |
Protein Length | 582 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637826441 |
Product | ABC transporter component |
Protein accession | YP_427426 |
Protein GI | 83593674 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.667532 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAGGG ACTTGGCGAC GATCCTGGGG CCACGGCATG CCGGCGCATT GCGTCTTTAC TTGGCTTGGC TGGTGGCTTA CGCGGTCTTG GAGGGGGTGG CCATCGCCTT CCTGGCGCCG GTTCTGGCGG CCTTGCTGAC CGGTGACGGA ACCGGCGCCT CGGTTTGGTT GCTAGGCATG GCCGGGGCTG TGCTGATGGC TTGCGTCGCC CGCTACCAGC AAGCGATGAA GGGGTTTTCC CTCGCCCTGG TGGTCCTCAC CACCGTGCAC GAGCGCTTGG GGGACCACGT GGCCTCGCTC CCGCTGGGCT GGTTCTCGTC CGAAAAGATC GGTCGCCTGT CCCAAAGCGC GACCGATGGC ACGACCATGG TCACCAATGT CTTCGCCCAT TTTCTGACCC CGGTGGTTAC CGGGGTGCTG ACGCCGGCGA CCCTTGCCGT GGTCATCGCG CTGACCGACT GGCGCCTGGG CTTGGCGGTG GCGGTTTGGG CGCCGTTCAT CTATTGGGCC CACCGTTGGT CGTCCACCTG GATCGGGCGG ACGGAGGAGG CGGTGGACGC CGCCGGCGCC ACCGCCAGCG CCCGGGTCGT GGAGTTCGCC CGGGCCCAAC CCGTGCTGCG GGCCTTCGGC CGGACGACGG ACGCCGGCTA CCAGCCGCTG GAGGACGCCA TCGAGGCCCA GCGGCGCGCC AATGGATCGG TTCTGAGCAC GACGTTTCCC CGTCTCCTGG TTGGTGGCCT CTCCGTTCAG GTCGCCTTCG TCACGCTGAT CTCCGTTGGC GTCCTGCTGG TCCTGGGCGG GACCCTGGAC GCGGTCGCTT TGGTCGCCCT GCTGGCGCTG GCCGCCCGTT TGGCCGGTCC CCTGGCCGAA GCCGCGGCGC GGAGCGGTTT GCTGCGCATG GCCAATAACG ACCTGCGGCG GCTGGCGGCC CTCTTCGCCG AAAAGGGGTT GCCCGAGCCG ATACAGCCGG CGCCTTTGAC GGAACCCGGT CGCATTGAAT TCGATCAGGT GGCGTTTGGC TACCGGCCGG GGGCGCCGGT GCTGCGCGAT GTCTCCTTCC GCGTCGATCC CCGGACGATG ACGGCGATCA TCGGGGACTC CGGATCGGGC AAGACGACCA TTATCCGCCT GATCATGCGC TTCTTCGACG TGGATGGGGG AAGCGTGCGG GTCGGCGGCC GCGACGTTCG TGAGCTGGAC GGGACAACGC TCATGGGCCA ACTCTCCCCG GTCATGCAGG ATGTCTATCT GTTCAACGAT ACCTTGGAGG CGAATATCCG CGTTGGGCGG CCGGACGCCA CCGCCGAGGA GGTTCGCGAG GCGGCCCGTC TCGCCGGGGT GGAGGATATC GTCGCGCGCC TGCCGGAGGG GTGGAACACC CCGGTGGGCG AGGGCGGCGC CCTGTTGTCG GGAGGCGAGC GCCAGCGGGT TTCGGTGGCG CGGGCCGTTC TGAAGAACGC GCCCATCGTG CTGCTCGATG AAGCCACGGC GGCGCTCGAT CCGGCGAATG AACGCTTTAT CGAGCAAACG ATGCGCGGCC TCAAGGCGCG GTCGACGCTT TTGGTCGTCG CCCACAGGCC GCGAACGATC GTCGCCGCCG ATCAGATCCT ATTCCTCCGG GGCGGTCGCA TCATCGACGT CGGCACACAT GACGGGCTGC TGGCGCGGAA CGCGGAGTAC GCGCGGTTTT GGCACGATCG TCATCGGGCG CAAGGGTGGC GCCTGATGGC GAAGGAGGAG ATCGCATGA
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Protein sequence | MIRDLATILG PRHAGALRLY LAWLVAYAVL EGVAIAFLAP VLAALLTGDG TGASVWLLGM AGAVLMACVA RYQQAMKGFS LALVVLTTVH ERLGDHVASL PLGWFSSEKI GRLSQSATDG TTMVTNVFAH FLTPVVTGVL TPATLAVVIA LTDWRLGLAV AVWAPFIYWA HRWSSTWIGR TEEAVDAAGA TASARVVEFA RAQPVLRAFG RTTDAGYQPL EDAIEAQRRA NGSVLSTTFP RLLVGGLSVQ VAFVTLISVG VLLVLGGTLD AVALVALLAL AARLAGPLAE AAARSGLLRM ANNDLRRLAA LFAEKGLPEP IQPAPLTEPG RIEFDQVAFG YRPGAPVLRD VSFRVDPRTM TAIIGDSGSG KTTIIRLIMR FFDVDGGSVR VGGRDVRELD GTTLMGQLSP VMQDVYLFND TLEANIRVGR PDATAEEVRE AARLAGVEDI VARLPEGWNT PVGEGGALLS GGERQRVSVA RAVLKNAPIV LLDEATAALD PANERFIEQT MRGLKARSTL LVVAHRPRTI VAADQILFLR GGRIIDVGTH DGLLARNAEY ARFWHDRHRA QGWRLMAKEE IA
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