| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2298 |
|---|
| Symbol | |
|---|
| ID | 3835726 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 2659133 |
|---|
| End bp | 2660233 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637826400 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_427385 |
|---|
| Protein GI | 83593633 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00541193 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGTAA CCGCCCTTAC GCTGCGTTCT TGCTTTTTCG GGGAAAAGGA GCGCCCGGTC
GTCTCCTTCG CCGGAATGAC CGCCAGCCTG TTCCGCTATG ACAGCGGCAT CGAGGCGATC
CGCCTGACCA ATGCGCGCGG TCATCTGGTC GTGCTGCCGT TCTTTGGCCA GATGATCTGG
GATGCCGTGT TCGACGGCGT CGATCTGACC ATGACCAATA TGTTCGCCCA ACCGCGCCCA
GCCGGGGAAA TCGTTGGCAC CTATGGCTGC TTCGCCTTCC ATTCCGGGCT GTTGCGCAAC
GGCTGTCCCT CGCCCGACGA TACCCATCCC CTGCACGGCG AAATGCCCTG CGCGCCGATG
GACGAGGCCG GGTTGGAAAC CGGCGTCGAT GAAAGCGGTC CCTATCTGGC GGTGACCGGC
ATGCGCGAAT ACGTCATGGG CTTTGGCGCC CATTACCGGG CCCGCCCCCG GGTGGTGCTG
CGCCCTACGG AGACGCTGTT CACCATCGCC ATGACGGTGG ACAATCTGGC GGGCGATCCC
ATGGACCTGA TGTACATGTG CCATGTGAAC TTCGCTTTCC AGGAAGGGGC CCGCATCGTT
CAGCCCGCCC CCTTCACGCC CGAACGCACG GTGGTGCGCA CCGCCATCCC CGGCCATGTG
GTGCCGACCG AGGATTACCG CGCCCTGCTC GCCGCCCTGG CCGTCGATCC TTCGGGGATG
GAGGTGCTGG ACGAGCCGGC GCGCTATGCC CCTGAACAGG TGTTTTATAT CCGCGACCCC
TTGAGCGACG CCCAGGGCCG CACCGCCCAG ATGATGCGCT TGCCCCAAGG CGGCGCCTTC
CATATCGCCT ATGACGGGGC GCTGTTTCCC AAATGCGTGC GCTGGGTGCT GGTCAACGAC
GATCAGAAGG TTTGCGCCTT CGCCCTGCCG TCGACCTGCG AACCCGAGGG CTATCTGGCC
GAAAAGGCCA AGGGCAATGT CCGCAGCTTG GCGCCGGGCC AAAGGGCGGC CTTCGCCGTG
ACTTTGGGCT ATCTCGATGA ACCGGCGGCC GAGGCCGCCG AACGGGCGAT CAAGGCCCTG
TCTTTTGGTA AGGGAGCTTA G
|
|---|
| Protein sequence | MSVTALTLRS CFFGEKERPV VSFAGMTASL FRYDSGIEAI RLTNARGHLV VLPFFGQMIW
DAVFDGVDLT MTNMFAQPRP AGEIVGTYGC FAFHSGLLRN GCPSPDDTHP LHGEMPCAPM
DEAGLETGVD ESGPYLAVTG MREYVMGFGA HYRARPRVVL RPTETLFTIA MTVDNLAGDP
MDLMYMCHVN FAFQEGARIV QPAPFTPERT VVRTAIPGHV VPTEDYRALL AALAVDPSGM
EVLDEPARYA PEQVFYIRDP LSDAQGRTAQ MMRLPQGGAF HIAYDGALFP KCVRWVLVND
DQKVCAFALP STCEPEGYLA EKAKGNVRSL APGQRAAFAV TLGYLDEPAA EAAERAIKAL
SFGKGA
|
|---|
| |