Gene Rru_A2220 details

Gene Information

• Locus tag: Rru_A2220
• Symbol: uvrC
• ID: 3835648
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodospirillum rubrum ATCC 11170
• Kingdom: Bacteria
• Replicon accession: NC_007643
• Strand: +
• Start bp: 2578520
• End bp: 2580439
• Gene Length: 1920 bp
• Protein Length: 639 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637826322
• Product: excinuclease ABC subunit C
• Protein accession: YP_427307
• Protein GI: 83593555
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0322] Nuclease subunit of the excinuclease complex
• TIGRFAM ID: [TIGR00194] excinuclease ABC, C subunit

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.0021269
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTGACC TGCCCGTCGA CGAGCCCGAC CGGGACGACG GCGCCGATCA GCCCGACGCC 
GGCGCCGACC CCGCCACCCC ACGCGGGGTC GAGGCGATCC GCGCCGCCTT GCGGACGATG 
CCATCAAGCC CCGGCGTCTA TCGCATGATC GATGGCAAGG GCGATGTTCT CTATGTGGGC 
AAGGCGCGCA ATCTGAAGCG CCGGGTGATC AACTACACCC AGCCCCATCG CCTGCCGGTG 
CGCATCCAAC GGATGATCGC CGCCACCCTG ACGATGGAGG TGCTGACCAC CCATACCGAA 
GCCGAGGCGC TGCTTCTTGA ATCCAACCTG ATCAAGAAGC TGAAGCCGCG CTACAACATC 
CTTTTGCGCG ACGACAAATC CTTCCCTTAT ATCGAGATCA CCTCCGATCA CGCCTTTCCT 
CGCATCGTCA AATTCCGCGG CACCCTGCGC AAAGGGGGGG AATATTTCGG CCCCTTCGCC 
TCGGCCGGCG CCGTCACCAG TACGCTCACC GCCTTGCAGA AAACCTTTTT GCTGCGCACC 
TGCGCCGATA ACGTTTTTGC CAGTCGCAGC CGGCCTTGCC TGCTGTTCCA AATCAAGCGC 
TGCGCCGCGC CCTGCGTCGA TCGGGTGGCG GAGGCGGATT ACAAGGCCCT GGTCGAAGAG 
GCCCGCGCCT TCCTCAGCGG CTCAAGCAAG GCGCTCCAGC ACGATCTGGC CAAGCGCATG 
GACGAGGCGG CCCAGGCCCT GGATTACGAA CAGGCGGCGA TCTTCCGCGA CCGCATCAAG 
GCGCTGACCA ATGTCCAGTC CCATCAGGAT ATCAATCTGC CGACCCTGGG CGAGGCCGAT 
GTCATCGCCT GCCATCAGGC CGGCGGCCAG ACCTGCGTCC AGGTCTTCTT TTTCCGTGGC 
GGCCGCAACA ACGGCAACCG CTCGTTCTTT CCCGCCCATG CCGGCGACGA GGGCCTGCCC 
GAGGTGCTCG AAGCCTTCCT CGGCCAGTTC TACGCCGGCT TCCCGCCGCC GCGCGAGATC 
TTGCTGCTGA CCGACATTCC CCACCACGAT CTGGTCGAAC AGGCGCTTTG CCTGCGCGCC 
GGCCACCGGG TGCGTCTGGT GGTGCCGCGC CGCGGGTCGC GGCGCAAGCT GATCGACCAC 
GCGTTGGCCA ATGCCCGCGA AGCTTTGGGC CGACGGCTGG CCGAAAGCTC GGCCCAGCGC 
ACCTTGCTGG AGGGGACGGC CGTGGCCTTC GGTCTCGACG GGCCGCTCCA GCGGGTCGAG 
ATCTACGACA ACAGCCATAT CTCGGGAACC CACGCGGTGG GCGGCATGGT GGTGGCCGGA 
CCGGAAGGCT TCATGAAGGC CGCCTATCGC AAATTCAACA TCCGCTCGCC CGATATCACC 
CCGGGCGACG ACTACGCCAT GATGCGCGAG GTGATGATCC GGCGCTTCGC CCGCGCCCGT 
AAGGAAGACC CCGACCGCGA CCGTGGCCAG TGGCCCGATC TGGTGCTGAT CGACGGCGGC 
CTCGGCCAGC TCAACGCCGT CCGCGAGGCC CTGGCCGAGA TCGGCGTCGA GGACGTGCCG 
CTGGTCGGCG TCGCCAAGGG CCCCGACCGC GATGCCGGAC GCGAGCGGTT CTTCGTTCCG 
GGGCGGCCAC CCTTCATGCT GCGCCACAAC GATCCGGTTT TGTATTTCAT CCAGCGCCTG 
CGCGACGAGG CCCACCGCTT CGCCATCGGC AGCCATCGCA CCCGGCGTTC AAAAGCGATC 
GGAGTCTCGC CCCTTGATAG CGTTCCGGGC ATCGGCGCCA GCCGCAAGAA AGCCCTTCTC 
CACCATTTCG GCTCGGCCAA GGCGGTTTCC CAGGCCGGAT TGACCGATCT GGAGGCGGTG 
GAGGGGATCA GCGCCGCCCT GGCCAAAAAA CTCTATGACC ACTTCCACAG CGAGGGATAA 

 

Protein sequence

MTDLPVDEPD RDDGADQPDA GADPATPRGV EAIRAALRTM PSSPGVYRMI DGKGDVLYVG 
KARNLKRRVI NYTQPHRLPV RIQRMIAATL TMEVLTTHTE AEALLLESNL IKKLKPRYNI 
LLRDDKSFPY IEITSDHAFP RIVKFRGTLR KGGEYFGPFA SAGAVTSTLT ALQKTFLLRT 
CADNVFASRS RPCLLFQIKR CAAPCVDRVA EADYKALVEE ARAFLSGSSK ALQHDLAKRM 
DEAAQALDYE QAAIFRDRIK ALTNVQSHQD INLPTLGEAD VIACHQAGGQ TCVQVFFFRG 
GRNNGNRSFF PAHAGDEGLP EVLEAFLGQF YAGFPPPREI LLLTDIPHHD LVEQALCLRA 
GHRVRLVVPR RGSRRKLIDH ALANAREALG RRLAESSAQR TLLEGTAVAF GLDGPLQRVE 
IYDNSHISGT HAVGGMVVAG PEGFMKAAYR KFNIRSPDIT PGDDYAMMRE VMIRRFARAR 
KEDPDRDRGQ WPDLVLIDGG LGQLNAVREA LAEIGVEDVP LVGVAKGPDR DAGRERFFVP 
GRPPFMLRHN DPVLYFIQRL RDEAHRFAIG SHRTRRSKAI GVSPLDSVPG IGASRKKALL 
HHFGSAKAVS QAGLTDLEAV EGISAALAKK LYDHFHSEG