| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2184 |
|---|
| Symbol | |
|---|
| ID | 3835611 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 2536082 |
|---|
| End bp | 2536699 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637826286 |
|---|
| Product | pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
|---|
| Protein accession | YP_427271 |
|---|
| Protein GI | 83593519 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3576] Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.353991 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAGG ATACCCGTCT GACGACGATC GCCGAGCTTG AAGCGCTTTA TGGCCGCCCG
TCGGGAGGGG CGGTGAGCAA GGAAACCGAT CATCTGATCG CGCCCTATCG CCGTTTCGTC
GAAGCCGCGC CTTTTCTCAG TCTGGCCACC CGGGGCGAGA AGGGCGTGGA ATGCTCGCCG
CGTGGCGATG CTCCGGGCTT CGTCAAGGTG CTTGATCCCC GGACCCTGCT GGTGCCCGAT
CGCAAGGGCA ACCGGCGCAT GGAATCTTTG CGCAATATCC TGACCGATCC CCATGTCGCC
CTGCTGTTCC TGATCCCCGG GGTCGGCGAG ACCCTGCGGG TGCGCGGCCG GGCGATCATC
TCCACCGATC CCGCCTTGCT CGCGCTTGGG ACGATGCGGG GCACCCCGCC GTTGTCGGCC
CTGGTGGTCA GCATTGACAG CGTGCTGTTC CAATGCTCGC GGGCGATCGC CCGTTCGGGG
CTGTGGACCG ACGAGGCGCG TGTTGAGCGC GCAAGCCTAC CCACCGCCGG CGAAATGCTC
AAAGCCACCG ATGCCACTTT CGATGGCGAT GGCTTCGATC AGGCCTGGAA GACCGAAGAA
AAGGCCGGGA TGGTTTGA
|
|---|
| Protein sequence | MAEDTRLTTI AELEALYGRP SGGAVSKETD HLIAPYRRFV EAAPFLSLAT RGEKGVECSP
RGDAPGFVKV LDPRTLLVPD RKGNRRMESL RNILTDPHVA LLFLIPGVGE TLRVRGRAII
STDPALLALG TMRGTPPLSA LVVSIDSVLF QCSRAIARSG LWTDEARVER ASLPTAGEML
KATDATFDGD GFDQAWKTEE KAGMV
|
|---|
| |