Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A2149 |
Symbol | |
ID | 3835576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 2496163 |
End bp | 2498832 |
Gene Length | 2670 bp |
Protein Length | 889 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637826251 |
Product | RNAse E |
Protein accession | YP_427236 |
Protein GI | 83593484 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1530] Ribonucleases G and E |
TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAAGC GCATGCTTAT CGATGCGAAC CACCCCGAAG AAACGCGGGT CGTGGTTCTG GACGGTACCC GTCTCGACGA GTTTGACGTC GAGACTTCAA CGAAGAAACA GCTTAAGGGA AACATCTACC TCGCCAAAGT CGTCCGCGTC GAACCCTCGC TCCAGGCCGC TTTCGTCGAA TACGGCGGCA ATCGCCATGG CTTCCTGGCC TTCAACGAGA TCCACCCGGA CTATTACCAG ATCCCCGTCG CCGACCGCGA AAAGCTGATC GCCGAGGAGG CGCTTGAAGC CGCCGCCGAT GACGATGACG AGGCCGACAG CGTCGAGACC CTGGGCGGCG ATGAAGCCGA AGACTCGGCC CCCGCTCCGC GCGCCAAATC GCGGGTCAGC CGCAGCTATA AGATCCAAGA GGTGATCAAG CGCCGGCAGA TCATGCTGGT GCAGGTCGTC AAGGAGGAGC GCGGCAACAA GGGCGCGGCT CTGACCACCT ATCTGTCGCT GGCCGGGCGC TATTGCGTGT TCATGCCCAA TACCACGCGC GGCGGCGGCG TTTCGCGCAA GATCACCAGC GCCACCGATC GCAAGCGCTT GAAGTCGATC ATGGGCGAAT TGATCGGCCC CAAGGGCAGC GCCGTCATCT TGCGCACGGC GGGCAGCGAG CGGTCGCGGG CCGAAATCCG CCGCGACCAT GACTATCTGC TGCGCACCTG GGATTCCATC CGGCAGACGA CGCTGGCCTC GCGCGCCCCT TGCCTGATCC ACGAGGAAGG CAGCCTGATC AAGCGCGCCA TCCGCGATAT CTATTCCCGC GACATCGAGG AAATCCTGGT CGAAGGCGAT GCCGGTTACC GCACCGCCAA GGATTTCATG AAGATGCTGA CGCCTTCGCA CGCCAAGAAG GTCCAGCCCT ACAAAGACGA GATCATGCCG CTTTTCCACC GCTATCAGGT GGAAAGCCAG ATGGATGCCA TGCATTCGCC GATCGCCCAG TTGCGCTCGG GCGGCTATCT GGTCATCAAC CAAACCGAGG CGCTGGTCGC CATCGACGTC AATTCGGGCC GCTCGACGCG CGAGCGCAAT ATCGAAGAGA CCGCCTATAA GACCAATCTG GAAGCCGCCG ACGAAATCGC CCGCCAGCTG CGCCTGCGCG ACCTGTCCGG GCTGATCGTC ATCGACTTCA TCGATATGGA CGATCCGCGC TCCAACGCCA ATGTCGAGCG CCGGGTCAAG GACGCGCTGC GCAACGACCG CGCCCGCATC CAGCTTGGCC GCATCAGCCA TTTCGGCCTG CTTGAAATGT CGCGCCAGCG GCTGCGCCCC AGCCTGATGG AAACCAGCTT CCAGCCCTGC CCGCATTGCC ATGGCTCGGG GTCGCTGCGC TCGGTCGAAT CCACGGCCAT CCATATCCTG CGCATCATCG AGGAAGAGGG CGTGCGCCGG CGTTCGAGCG AGGTCACGGT CACCGTGCCG ACGGCGATCG CCCTTTACAT CCTAAACAAC AAGCGCACCG TTCTGGCCGC CATCGAGGCG CGCTATGACT TCCAGGTGTT CTTGCTGGGC GACGACACGC TGATCGTTCC CGATTATCGC ATGGACCGGG TGAAGGCCGA GCGCGAGGGC TTGGATGCCC TGCCCGCCGC CGCCCCCCCG CCGACCGCGC CCGTCGCCGC CCTGCCGGCG CCCGAGGTCC TGGAAGACGA GGACGAGGAC GAGGGCACCG TCGAGGACGA GGCCTTCGCC GAAGAGAACG GCCAAAACGG CGCCGATGCC GATGGACAGG GCCGCAAGCG CCGCCGCCGT CGCCGCCGTC GCCGCAAGGA TCAGGACGGC GTGGAGATCG AAGGCTCGTC CGTCGACGAC GAAGAGGGCG CGCCCGAAGG CACGGCTGAC TCGACCGAGG ACGAGGGCGC CGATGACGAG GGTGAGACCG GCGACGAGGC CGAGGACACG GGCGACGAGT TGGACCCGGC CGACGGGTCG CTGAGCGATC GTGATGGCCA GTCGCGCCGC CGCCGCCGTC GCCGCGGCCG TCGCGGTCGT CGCGACGACA CGGGCAACGG CTTGCCCGAG CCCGCCGTGC CGGCCTCGAC CGCCGATACC CTGCCCCTTG ATGACGACTC GATCGAAAGC GCCGAGATCG ACGACGATCC GACCGCCGAG GACGAGATCA TCTCGTCGAC CGACGCGGAC AGCGCCCCGG CCGGCGAGGA CTCTGCGGCG GCGATCACCG ATGAGCTTGG CCGCGAGGGT CGCCGTCCGC CGCGTCGCCG TCGCCCCCGC CGCAAGGATC GGGGCGTCGA GACCAACCGC GCCATCGCCC TTGACGCCAG CGACGCCGAA GCCGGCCCGG CGACCGCCGA AACGGATCTC GCCGCCTTCG ACGACGCCCC GGACGCCGAG GCGCCCTTCG CTGAGCCCTT GGGCGATGAG CGGTTGCTCG ACGAGACCCC CGCCGAGATC GCCGAGGCCG AGGCCGAAGT CGAGACCGCC GAGACGGACA TCGACCGCGA CCCCGCCGAC GGGGAACCGC CGACCGCACC CGTCGCGCCG CCGCCGGTCG CCGTCGTCAA GACCCCCGAC CCCGCGGCCG CCGCCGCCCC GCCGGCCGCG GTCCCGTCTT CCGACCAACC CCGCCGCGTT GGCTGGTGGT CGAAACTGAT GTCGTCCTGA
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Protein sequence | MTKRMLIDAN HPEETRVVVL DGTRLDEFDV ETSTKKQLKG NIYLAKVVRV EPSLQAAFVE YGGNRHGFLA FNEIHPDYYQ IPVADREKLI AEEALEAAAD DDDEADSVET LGGDEAEDSA PAPRAKSRVS RSYKIQEVIK RRQIMLVQVV KEERGNKGAA LTTYLSLAGR YCVFMPNTTR GGGVSRKITS ATDRKRLKSI MGELIGPKGS AVILRTAGSE RSRAEIRRDH DYLLRTWDSI RQTTLASRAP CLIHEEGSLI KRAIRDIYSR DIEEILVEGD AGYRTAKDFM KMLTPSHAKK VQPYKDEIMP LFHRYQVESQ MDAMHSPIAQ LRSGGYLVIN QTEALVAIDV NSGRSTRERN IEETAYKTNL EAADEIARQL RLRDLSGLIV IDFIDMDDPR SNANVERRVK DALRNDRARI QLGRISHFGL LEMSRQRLRP SLMETSFQPC PHCHGSGSLR SVESTAIHIL RIIEEEGVRR RSSEVTVTVP TAIALYILNN KRTVLAAIEA RYDFQVFLLG DDTLIVPDYR MDRVKAEREG LDALPAAAPP PTAPVAALPA PEVLEDEDED EGTVEDEAFA EENGQNGADA DGQGRKRRRR RRRRRKDQDG VEIEGSSVDD EEGAPEGTAD STEDEGADDE GETGDEAEDT GDELDPADGS LSDRDGQSRR RRRRRGRRGR RDDTGNGLPE PAVPASTADT LPLDDDSIES AEIDDDPTAE DEIISSTDAD SAPAGEDSAA AITDELGREG RRPPRRRRPR RKDRGVETNR AIALDASDAE AGPATAETDL AAFDDAPDAE APFAEPLGDE RLLDETPAEI AEAEAEVETA ETDIDRDPAD GEPPTAPVAP PPVAVVKTPD PAAAAAPPAA VPSSDQPRRV GWWSKLMSS
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