| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2147 |
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| Symbol | |
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| ID | 3835574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 2491117 |
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| End bp | 2493612 |
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| Gene Length | 2496 bp |
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| Protein Length | 831 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637826249 |
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| Product | penicillin-binding protein 1A |
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| Protein accession | YP_427234 |
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| Protein GI | 83593482 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.173589 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCGGA TTCTGCTGAC CCTGGTCATG ATCGGCATGG TCGGCGGCGC CGGCGGCACG
GCCTATCTGC TCAATTCCTA TGGGAGCGAC CTGCCCGATT ACGGCGCCCT GGCCAATTAC
GAGCCGCCGA TCACCACTCG GGTTCTGGCC AGCGATGGCC GTTTGATGGC GGAATACGCC
ATCGAAAAGC GGGTCTATGT GCCGATCAAC GCCATTCCCC AGAAGGTCAA GGACGCCTTT
TTGTCGGCCG AGGACAAGAA CTTCTACACC CACTCGGGCG TGGATTTCGT CGGGCTGTTC
CGCGCCGTGC TGACCAATCT GCAGAACTAT GGCTCGGGCC GGCGGCCGGT CGGCGCCTCG
ACCATCACCC AGCAGGTGGC CAAGAACTTT CTGCTGACCA ACGAGGTGTC CTTTGATCGC
AAGGTCAAGG AAGCCATCTT GGCCTTCCGC ATCGAGGAGG CCTTTTCCAA GGATCACATT
CTGGAACTGT ATCTGAACGA GATCTATCTC GGCTTCAGTT CCTATGGGGT GGCCGCGGCG
GCGGTGAACT ACTTCAACAA AAGCCTTGAT GAGCTGACCA TCGGCGAGGT CGCCTTCCTC
GCCGCCTTGC CCAAGGCCCC CAACAACTAC AATCCGGTGC GCAAGAACGA CGCGGCCAAG
GCCCGTCGCG ACTGGGTGGT CGACCGCATG GTCGAGGATG ATCACATCAC CCAGGCCGAG
GGCGAAGCGG CCAAGGCCGA GCCCCTGGAG GTGCGCAGCC GTGACGAGAC CCAGCTTGTG
CGCCATGCCG ACTTCTTCTC GGAAGAGGTC CGCCGACAGC TGCAAAGCCG CTATGGCGAA
GAGGCGCTTT ACAAGGGCGG GCTTTACGTG CGCACCACCC TTGATCCCCG CCTTCAGGAG
ATCGGGGCGC GGGCCCTGCG CAAGGGGCTG ATCGATTACG ATCGCCGCCA TGGCTGGCGC
GGCCCGGTGA CCCGCCTGGA AAACGTTCAG GAATGGAAGG CGCGTCTGGC CGAATTGCCC
GTTCCCCCCG GCGCCTCGAC CAACTGGCGG TTGGCCGCCG TGCTGCGGCT TGATGCCGGC
GAGGTCAAGC TTGGCCTGCC CGACGGCTTC GGCGGCGCCA TCCCGATGAA GGAAATGGCC
TGGGCCCGGC CGACGCTCGA CGGTCAGCGG GTGGGCAACG CCCCCAAGAA GCCCGCCGAT
GTCTTGAAGG TTGGCGATGT CGTGCTGGTC GAGCCTTTGG AGAAGGACGA CAAGGGCAAG
GCCTATGCGC CCGGAACCTA TGGCTTGCGC CAGATGCCCA ATGTCGAAGG CGCCCTGGTC
GCCATGGATC CCCATACCGG CCGGGTGATG GCGATGGTCG GCGGCTTCGC GCCCGAGCGC
AGCGAGTTCA ACCGGGCGAT CCAGGCCAAG CGCCAGCCCG GCTCGTCGTT CAAGCCCTTC
GTCTATCTGG CCGCCCTCGA TCACGGCTAT ACGCCGGCGA CCATCATCCT TGACGCGCCG
TTCGTCTATG ATCCGGGCCC CGGCCAACCC TTGTGGAAGC CTAAGAACTA CAGCGGCCAG
TTCTACGGCC CCTCGACCCT GCGTCGGGGT GTCGAGATGT CGCGTAACCT GATGACGGTG
CGTCTGGCCA ATGCGGTGGG CATGGATGTG GTCGCCGAAT ATGCCGAGCG CTTCGGCGTC
GTCCACACCA TGCCGCGCGT CCTCGCCGCC TCGCTCGGCG CCGTCGAGAC CACGGTGATG
GACATGACGA CGGCCTATGC GATGCTGGTC AATGGCGGGC GGCGGATCGC CCCGACGCTG
ATCGACCGCA TCCAGGACCG CACCGGCACC ACCGTCTATC GCCATGACGA GCGGCCCTGC
GATGCCTGCA AGGCGTCGCA ATGGGCGGGT CAGGCCGTGC CGGCGGTCGT TGACAATCGC
GAGATCATGA CCGATCCGCT GTCGGCCTAT CAGATCGTGT CGATCCTTCA GGGCGTCGTC
CAGCGCGGCA CCGGCGGCAA AGTCCAGGCG GTGGGCAAAT CGGTCGCCGG CAAGACCGGC
ACCTCGAACG ACAGCCTCGA TACTTGGTTC GTCGGCTTTT CGCCCGATCT GGTCTGCGGG
GTCTTCGTCG GCTTCGACGA GCCCAAGTCC CTGGGGTCCC ATGAGGCCGG GTCGACGACG
GCGGCGCCGA TCTTCACGAC CTTCATGAAG GAAGCCCTGG CCGACAAGCC CGATATTCCC
TTCCGCGTGC CCGAGGGTAT CAAATTCGTC CGCATCGATC CCCAGACCGG CCAGCGCGCC
GGCCCGGGAA CCTCCAACGC CATCCTTGAG GCCTTCAAGC CGGGATCCGA GCCCTCGCTG
GCCTCGAGTT ATGTGATCGA CGGATCGGCG CCGGTGGGCG ATTACGGCGC CTATTACGGC
GGCGTCGGCG GCGAGGGCGC CACCGGCGTT CCCGGTCAGG CGGCCCCGGG CTTCGGCGCC
GGTGGCGCCC CGCCCCAGGC GGGCGGCCTT TATTAG
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| Protein sequence | MIRILLTLVM IGMVGGAGGT AYLLNSYGSD LPDYGALANY EPPITTRVLA SDGRLMAEYA
IEKRVYVPIN AIPQKVKDAF LSAEDKNFYT HSGVDFVGLF RAVLTNLQNY GSGRRPVGAS
TITQQVAKNF LLTNEVSFDR KVKEAILAFR IEEAFSKDHI LELYLNEIYL GFSSYGVAAA
AVNYFNKSLD ELTIGEVAFL AALPKAPNNY NPVRKNDAAK ARRDWVVDRM VEDDHITQAE
GEAAKAEPLE VRSRDETQLV RHADFFSEEV RRQLQSRYGE EALYKGGLYV RTTLDPRLQE
IGARALRKGL IDYDRRHGWR GPVTRLENVQ EWKARLAELP VPPGASTNWR LAAVLRLDAG
EVKLGLPDGF GGAIPMKEMA WARPTLDGQR VGNAPKKPAD VLKVGDVVLV EPLEKDDKGK
AYAPGTYGLR QMPNVEGALV AMDPHTGRVM AMVGGFAPER SEFNRAIQAK RQPGSSFKPF
VYLAALDHGY TPATIILDAP FVYDPGPGQP LWKPKNYSGQ FYGPSTLRRG VEMSRNLMTV
RLANAVGMDV VAEYAERFGV VHTMPRVLAA SLGAVETTVM DMTTAYAMLV NGGRRIAPTL
IDRIQDRTGT TVYRHDERPC DACKASQWAG QAVPAVVDNR EIMTDPLSAY QIVSILQGVV
QRGTGGKVQA VGKSVAGKTG TSNDSLDTWF VGFSPDLVCG VFVGFDEPKS LGSHEAGSTT
AAPIFTTFMK EALADKPDIP FRVPEGIKFV RIDPQTGQRA GPGTSNAILE AFKPGSEPSL
ASSYVIDGSA PVGDYGAYYG GVGGEGATGV PGQAAPGFGA GGAPPQAGGL Y
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