Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A2127 |
Symbol | |
ID | 3835554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 2469850 |
End bp | 2470617 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637826229 |
Product | Serine 3-dehydrogenase |
Protein accession | YP_427214 |
Protein GI | 83593462 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.247906 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAACA CGGTTTTCAT CACCGGCGCC ACCGCCGGTT TTGGCGAGGC TTGCGCGCGG CGGTTCGCCG AGGCCGGCTG GGCCCTGGTG CTGACCGGCC GGCGGGCGGA GCGGCTGGAG GCGCTGAAGG CCGAATTGGG CGCCAGCGTG CCCGTTCACG CCGCGGTGAT GGACGTGCGC GACCGCGCCT CGGTCCAGGC GGTAATCGCG GCTCTGCCCG CGCCGTTTGA CAAGGTCCAT ACGCTGATCA ACAACGCCGG TCTGGCGGCG GGGCTGGAAA AGGCCGCCGA GGCCTCGCTC GACGACTGGC AGACGATGAT CGACACCAAT GTCACCGGTC TGGTCACCTG CACCCATGCC CTGCTGCCCC GGCTGATCGC GGCGGGCAAC GGGTCGATCA TCAATCTTGG CTCGGTCGCC GGGCGCTGGC CCTATCCGGG CGGCAGCGTC TATGGCGGGA CCAAGGCCTT CGTCCGCCAG TTCAGCCTGA ATTTGCGCAA TGACCTGCTG GGCACCGGGG TGCGGGTGAC CGATATCGAA CCAGGCATGG CCGAAAGCGA GTTTTCGATC GTGCGCTTCA AGGGCGACCG CGAGGCGGCC AGCAAGGTTT ATGCCGGCGT CGATCCGCTG ACCCCCAAGG ACATCGCCGA AACCATCTTC TGGGTCGCCA CCCAGCCCCC CCATATTAAC ATCAACACCC TGGAAATCAT GCCCGTCGCC CAGGCCTGGG CCGGCTTCGC CGTCCACCGC CGCCCCGCCG CCGAGTAG
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Protein sequence | MTNTVFITGA TAGFGEACAR RFAEAGWALV LTGRRAERLE ALKAELGASV PVHAAVMDVR DRASVQAVIA ALPAPFDKVH TLINNAGLAA GLEKAAEASL DDWQTMIDTN VTGLVTCTHA LLPRLIAAGN GSIINLGSVA GRWPYPGGSV YGGTKAFVRQ FSLNLRNDLL GTGVRVTDIE PGMAESEFSI VRFKGDREAA SKVYAGVDPL TPKDIAETIF WVATQPPHIN INTLEIMPVA QAWAGFAVHR RPAAE
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