Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A2126 |
Symbol | |
ID | 3835553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 2468818 |
End bp | 2469660 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637826228 |
Product | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase |
Protein accession | YP_427213 |
Protein GI | 83593461 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.557547 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTCT TGCGTTATGG TCCCGTGGGT CGGGAACGGC CCGGTCTGAT CGACGCCGAT GGCCGCATCC GCGATCTTAG CGATTATCTT GCCGATTTCG CCGGGGCCTC GCTGGGGCCC GCGTCGCTGG CCCGCCTTTC CAACCTTGAT CCGGCCGATC TGCCGCTGGT CGAAGGACAG CCGCGCCTTG GCCCCTGTGT CGGCCATGTC GGCAAGCTGA TCTGCATCGG CCTGAATTAC TCCGATCACG CCGCCGAAAC CGGCGCCAGC GTGCCCAGCG AGCCGATCGT TTTCCTCAAG GCGACCAGCG CCATCGTCGG CCCCAACGAC GACCTGGAAC TTCCGCGCGG ATCGACCAAG ACCGATTGGG AGGTGGAACT GGGCGTCGTC ATCGGCACCC CCGCCAAATA TGTGAGCGAG GAGGACGCCC TGGACCATGT CGCGGGCTAT TGCGTGGTTC ACGACGTCTC CGAACGCGCC TTCCAACTGG AGCGCCAGGG CCAATGGACC AAGGGCAAGT CCTGCGACAC CTTCGGCCCC ATCGGCCCCT GGCTGGTCAC CGCCGACGAG ATCGCCGATC CCCAAGACCT TGACCTGTGG CTCGAGGTCA ACGGCGAGCG CCGGCAGACC GGCTCGACGC GGACGATGAT CTTCGGCGTC GCCCGCTTGG TCTCCTATCT TTCGCAGATC ATGACCCTGC ACCCCGGCGA TATCCTGTCC ACCGGAACGC CCCCCGGGGT CGGCCTGGGG ATGACGCCGC CAACCTTCCT TCAGCCCGGC GACGTGGTCC GCCTTGGGGT CGAGGGCTTG GGCGTTCAGT GCCAGACGGT TATCCAGGGA TAA
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Protein sequence | MKLLRYGPVG RERPGLIDAD GRIRDLSDYL ADFAGASLGP ASLARLSNLD PADLPLVEGQ PRLGPCVGHV GKLICIGLNY SDHAAETGAS VPSEPIVFLK ATSAIVGPND DLELPRGSTK TDWEVELGVV IGTPAKYVSE EDALDHVAGY CVVHDVSERA FQLERQGQWT KGKSCDTFGP IGPWLVTADE IADPQDLDLW LEVNGERRQT GSTRTMIFGV ARLVSYLSQI MTLHPGDILS TGTPPGVGLG MTPPTFLQPG DVVRLGVEGL GVQCQTVIQG
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